Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP6P35125 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP6P35125 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP6P35125 PPT1-215ENST00000641471 2368 ntBASIC19.94■□□□□ 0.78
USP6P35125 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP6P35125 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP6P35125 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP6P35125 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC19.94■□□□□ 0.78
USP6P35125 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
USP6P35125 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP6P35125 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP6P35125 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
USP6P35125 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC19.93■□□□□ 0.78
USP6P35125 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC19.93■□□□□ 0.78
USP6P35125 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC19.93■□□□□ 0.78
USP6P35125 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC19.93■□□□□ 0.78
USP6P35125 CTBP2P4-201ENST00000513884 920 ntBASIC19.93■□□□□ 0.78
USP6P35125 MIR4649-201ENST00000582839 64 ntBASIC19.93■□□□□ 0.78
USP6P35125 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP6P35125 PGR-210ENST00000619228 3038 ntTSL 5 BASIC19.93■□□□□ 0.78
USP6P35125 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP6P35125 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.93■□□□□ 0.78
USP6P35125 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP6P35125 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP6P35125 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP6P35125 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP6P35125 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP6P35125 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP6P35125 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
USP6P35125 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC19.93■□□□□ 0.78
USP6P35125 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP6P35125 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP6P35125 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC19.93■□□□□ 0.78
USP6P35125 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP6P35125 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC19.93■□□□□ 0.78
USP6P35125 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC19.93■□□□□ 0.78
USP6P35125 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP6P35125 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
USP6P35125 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP6P35125 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
USP6P35125 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP6P35125 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP6P35125 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
USP6P35125 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.93■□□□□ 0.78
USP6P35125 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP6P35125 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC19.93■□□□□ 0.78
USP6P35125 CHCHD2P9-201ENST00000461726 456 ntBASIC19.93■□□□□ 0.78
USP6P35125 ORAOV1P1-201ENST00000503108 395 ntBASIC19.93■□□□□ 0.78
USP6P35125 MRPL22P1-201ENST00000505398 616 ntBASIC19.93■□□□□ 0.78
USP6P35125 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC19.93■□□□□ 0.78
USP6P35125 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
USP6P35125 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC19.93■□□□□ 0.78
USP6P35125 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP6P35125 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP6P35125 AC025262.2-201ENST00000623975 1056 ntBASIC19.93■□□□□ 0.78
USP6P35125 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP6P35125 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
USP6P35125 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
USP6P35125 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP6P35125 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP6P35125 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.92■□□□□ 0.78
USP6P35125 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP6P35125 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP6P35125 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP6P35125 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP6P35125 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP6P35125 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
USP6P35125 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.92■□□□□ 0.78
USP6P35125 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP6P35125 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP6P35125 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC19.92■□□□□ 0.78
USP6P35125 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP6P35125 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.92■□□□□ 0.78
USP6P35125 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP6P35125 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP6P35125 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC19.92■□□□□ 0.78
USP6P35125 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
USP6P35125 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP6P35125 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC19.92■□□□□ 0.78
USP6P35125 JTB-202ENST00000356648 1040 ntTSL 2 BASIC19.92■□□□□ 0.78
USP6P35125 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC19.92■□□□□ 0.78
USP6P35125 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
USP6P35125 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP6P35125 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC19.92■□□□□ 0.78
USP6P35125 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP6P35125 AL807761.2-201ENST00000422849 729 ntBASIC19.92■□□□□ 0.78
USP6P35125 RHEB-207ENST00000496004 744 ntTSL 2 BASIC19.92■□□□□ 0.78
USP6P35125 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC19.92■□□□□ 0.78
USP6P35125 IGHV3-37-201ENST00000518544 340 ntBASIC19.92■□□□□ 0.78
USP6P35125 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP6P35125 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC19.92■□□□□ 0.78
USP6P35125 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC19.92■□□□□ 0.78
USP6P35125 AC009560.1-201ENST00000620208 434 ntBASIC19.92■□□□□ 0.78
USP6P35125 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP6P35125 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP6P35125 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP6P35125 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP6P35125 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP6P35125 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC19.91■□□□□ 0.78
USP6P35125 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms