Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF1P30408 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TM4SF1P30408 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC18.34■□□□□ 0.53
TM4SF1P30408 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC18.34■□□□□ 0.53
TM4SF1P30408 AC244250.3-201ENST00000620749 366 ntBASIC18.34■□□□□ 0.53
TM4SF1P30408 C18orf15-201ENST00000623680 2534 ntBASIC18.34■□□□□ 0.53
TM4SF1P30408 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF1P30408 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF1P30408 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF1P30408 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF1P30408 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TM4SF1P30408 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.33■□□□□ 0.53
TM4SF1P30408 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TM4SF1P30408 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TM4SF1P30408 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TM4SF1P30408 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TM4SF1P30408 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
TM4SF1P30408 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TM4SF1P30408 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TM4SF1P30408 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.33■□□□□ 0.53
TM4SF1P30408 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.33■□□□□ 0.52
TM4SF1P30408 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TM4SF1P30408 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TM4SF1P30408 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC18.33■□□□□ 0.52
TM4SF1P30408 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TM4SF1P30408 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF1P30408 GUSBP10-201ENST00000417412 665 ntBASIC18.33■□□□□ 0.52
TM4SF1P30408 IDS-203ENST00000428056 1213 ntTSL 2 BASIC18.33■□□□□ 0.52
TM4SF1P30408 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF1P30408 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TM4SF1P30408 AC007952.4-201ENST00000573866 637 ntBASIC18.33■□□□□ 0.52
TM4SF1P30408 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC18.33■□□□□ 0.52
TM4SF1P30408 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF1P30408 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF1P30408 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.33■□□□□ 0.52
TM4SF1P30408 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF1P30408 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.33■□□□□ 0.52
TM4SF1P30408 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF1P30408 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.33■□□□□ 0.52
TM4SF1P30408 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF1P30408 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.33■□□□□ 0.52
TM4SF1P30408 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
TM4SF1P30408 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TM4SF1P30408 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TM4SF1P30408 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.33■□□□□ 0.52
TM4SF1P30408 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF1P30408 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF1P30408 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TM4SF1P30408 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF1P30408 KRT8P28-201ENST00000433288 1390 ntBASIC18.32■□□□□ 0.52
TM4SF1P30408 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TM4SF1P30408 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.32■□□□□ 0.52
TM4SF1P30408 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC18.32■□□□□ 0.52
TM4SF1P30408 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF1P30408 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF1P30408 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF1P30408 AC023024.2-201ENST00000623561 1993 ntBASIC18.32■□□□□ 0.52
TM4SF1P30408 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
TM4SF1P30408 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF1P30408 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC18.32■□□□□ 0.52
TM4SF1P30408 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC18.32■□□□□ 0.52
TM4SF1P30408 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC18.32■□□□□ 0.52
TM4SF1P30408 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC18.32■□□□□ 0.52
TM4SF1P30408 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC18.32■□□□□ 0.52
TM4SF1P30408 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC18.32■□□□□ 0.52
TM4SF1P30408 DPY19L2P5-201ENST00000456300 331 ntBASIC18.32■□□□□ 0.52
TM4SF1P30408 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC18.32■□□□□ 0.52
TM4SF1P30408 RNA5SP417-201ENST00000516459 108 ntBASIC18.32■□□□□ 0.52
TM4SF1P30408 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF1P30408 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC18.32■□□□□ 0.52
TM4SF1P30408 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC18.32■□□□□ 0.52
TM4SF1P30408 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC18.32■□□□□ 0.52
TM4SF1P30408 DNM1P51-201ENST00000558149 522 ntBASIC18.32■□□□□ 0.52
TM4SF1P30408 AC002472.4-201ENST00000641915 272 ntBASIC18.32■□□□□ 0.52
TM4SF1P30408 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC18.32■□□□□ 0.52
TM4SF1P30408 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF1P30408 USP4-203ENST00000415188 1454 ntTSL 3 BASIC18.32■□□□□ 0.52
TM4SF1P30408 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.32■□□□□ 0.52
TM4SF1P30408 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF1P30408 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF1P30408 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF1P30408 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.31■□□□□ 0.52
TM4SF1P30408 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC18.31■□□□□ 0.52
TM4SF1P30408 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF1P30408 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
TM4SF1P30408 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC18.31■□□□□ 0.52
TM4SF1P30408 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF1P30408 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF1P30408 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TM4SF1P30408 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF1P30408 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF1P30408 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC18.31■□□□□ 0.52
TM4SF1P30408 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC18.31■□□□□ 0.52
TM4SF1P30408 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC18.31■□□□□ 0.52
TM4SF1P30408 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TM4SF1P30408 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC18.31■□□□□ 0.52
TM4SF1P30408 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC18.31■□□□□ 0.52
TM4SF1P30408 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC18.31■□□□□ 0.52
TM4SF1P30408 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF1P30408 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms