Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.29■□□□□ 0.04
CCND1P24385 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CCND1P24385 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.29■□□□□ 0.04
CCND1P24385 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CCND1P24385 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.29■□□□□ 0.04
CCND1P24385 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.29■□□□□ 0.04
CCND1P24385 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.29■□□□□ 0.04
CCND1P24385 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.29■□□□□ 0.04
CCND1P24385 AC055876.3-201ENST00000431496 288 ntBASIC15.29■□□□□ 0.04
CCND1P24385 TARDBPP1-201ENST00000442013 1203 ntBASIC15.29■□□□□ 0.04
CCND1P24385 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.29■□□□□ 0.04
CCND1P24385 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.29■□□□□ 0.04
CCND1P24385 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.29■□□□□ 0.04
CCND1P24385 AC025048.3-201ENST00000590609 569 ntBASIC15.29■□□□□ 0.04
CCND1P24385 AC138649.4-201ENST00000612222 287 ntBASIC15.29■□□□□ 0.04
CCND1P24385 AC005702.4-201ENST00000618393 416 ntBASIC15.29■□□□□ 0.04
CCND1P24385 AL590560.3-201ENST00000623350 461 ntBASIC15.29■□□□□ 0.04
CCND1P24385 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.29■□□□□ 0.04
CCND1P24385 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.29■□□□□ 0.04
CCND1P24385 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCND1P24385 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CCND1P24385 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CCND1P24385 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.29■□□□□ 0.04
CCND1P24385 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 AC113367.3-201ENST00000508316 1912 ntBASIC15.29■□□□□ 0.04
CCND1P24385 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCND1P24385 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CCND1P24385 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.28■□□□□ 0.04
CCND1P24385 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CCND1P24385 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.28■□□□□ 0.04
CCND1P24385 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.28■□□□□ 0.04
CCND1P24385 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC15.28■□□□□ 0.04
CCND1P24385 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCND1P24385 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.28■□□□□ 0.04
CCND1P24385 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.28■□□□□ 0.04
CCND1P24385 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.28■□□□□ 0.04
CCND1P24385 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.28■□□□□ 0.04
CCND1P24385 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCND1P24385 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.28■□□□□ 0.04
CCND1P24385 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
CCND1P24385 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.28■□□□□ 0.04
CCND1P24385 RFPL4AP1-201ENST00000530883 850 ntBASIC15.28■□□□□ 0.04
CCND1P24385 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.28■□□□□ 0.04
CCND1P24385 AL512361.1-201ENST00000554200 418 ntBASIC15.28■□□□□ 0.04
CCND1P24385 DUX4L27-201ENST00000554796 1261 ntBASIC15.28■□□□□ 0.04
CCND1P24385 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.28■□□□□ 0.04
CCND1P24385 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.28■□□□□ 0.04
CCND1P24385 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.28■□□□□ 0.04
CCND1P24385 AC093512.1-201ENST00000617969 520 ntBASIC15.28■□□□□ 0.04
CCND1P24385 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCND1P24385 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCND1P24385 AC105206.1-202ENST00000314927 2368 ntBASIC15.28■□□□□ 0.04
CCND1P24385 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.28■□□□□ 0.04
CCND1P24385 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
CCND1P24385 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.28■□□□□ 0.04
CCND1P24385 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCND1P24385 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCND1P24385 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.28■□□□□ 0.04
CCND1P24385 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCND1P24385 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.27■□□□□ 0.04
CCND1P24385 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CCND1P24385 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms