Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.35□□□□□ -0.11
MMP11P24347 AC138951.2-201ENST00000623455 1161 ntBASIC14.35□□□□□ -0.11
MMP11P24347 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP11P24347 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
MMP11P24347 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
MMP11P24347 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
MMP11P24347 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.35□□□□□ -0.11
MMP11P24347 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.35□□□□□ -0.11
MMP11P24347 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MMP11P24347 AC007787.1-201ENST00000588095 1583 ntBASIC14.34□□□□□ -0.11
MMP11P24347 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.34□□□□□ -0.11
MMP11P24347 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.34□□□□□ -0.11
MMP11P24347 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MMP11P24347 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
MMP11P24347 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.34□□□□□ -0.11
MMP11P24347 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.34□□□□□ -0.11
MMP11P24347 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.34□□□□□ -0.11
MMP11P24347 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.34□□□□□ -0.11
MMP11P24347 FAM197Y7-201ENST00000432892 766 ntBASIC14.34□□□□□ -0.11
MMP11P24347 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 RNA5SP486-201ENST00000515961 83 ntBASIC14.34□□□□□ -0.11
MMP11P24347 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.34□□□□□ -0.11
MMP11P24347 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.34□□□□□ -0.11
MMP11P24347 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.34□□□□□ -0.11
MMP11P24347 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.34□□□□□ -0.11
MMP11P24347 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.34□□□□□ -0.11
MMP11P24347 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.34□□□□□ -0.11
MMP11P24347 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.34□□□□□ -0.11
MMP11P24347 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.34□□□□□ -0.11
MMP11P24347 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.34□□□□□ -0.11
MMP11P24347 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
MMP11P24347 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MMP11P24347 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.34□□□□□ -0.11
MMP11P24347 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
MMP11P24347 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MMP11P24347 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
MMP11P24347 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MMP11P24347 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
MMP11P24347 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.33□□□□□ -0.11
MMP11P24347 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
MMP11P24347 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MMP11P24347 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.33□□□□□ -0.12
MMP11P24347 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.33□□□□□ -0.12
MMP11P24347 AC007191.1-201ENST00000623179 2995 ntBASIC14.33□□□□□ -0.12
MMP11P24347 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.33□□□□□ -0.12
MMP11P24347 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
MMP11P24347 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.33□□□□□ -0.12
MMP11P24347 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
MMP11P24347 AL139094.1-201ENST00000405549 1188 ntBASIC14.33□□□□□ -0.12
MMP11P24347 CD8B2-202ENST00000417670 633 ntBASIC14.33□□□□□ -0.12
MMP11P24347 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.33□□□□□ -0.12
MMP11P24347 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.33□□□□□ -0.12
MMP11P24347 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.33□□□□□ -0.12
MMP11P24347 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MMP11P24347 AC078819.1-201ENST00000547454 765 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms