Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB3BP20337 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RAB3BP20337 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB3BP20337 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RAB3BP20337 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB3BP20337 AC016397.2-201ENST00000624848 1985 ntBASIC13.29□□□□□ -0.28
RAB3BP20337 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB3BP20337 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB3BP20337 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB3BP20337 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RAB3BP20337 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RAB3BP20337 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB3BP20337 AL353705.2-201ENST00000428243 662 ntBASIC13.29□□□□□ -0.28
RAB3BP20337 AC007967.2-201ENST00000432613 625 ntBASIC13.29□□□□□ -0.28
RAB3BP20337 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB3BP20337 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB3BP20337 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB3BP20337 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB3BP20337 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.29□□□□□ -0.28
RAB3BP20337 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.29□□□□□ -0.28
RAB3BP20337 LINC01225-203ENST00000563550 1244 ntBASIC13.29□□□□□ -0.28
RAB3BP20337 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.29□□□□□ -0.28
RAB3BP20337 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
RAB3BP20337 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB3BP20337 AC018665.1-201ENST00000622927 1362 ntBASIC13.29□□□□□ -0.28
RAB3BP20337 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB3BP20337 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
RAB3BP20337 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB3BP20337 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RAB3BP20337 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 DGCR9-201ENST00000609630 2415 ntBASIC13.29□□□□□ -0.28
RAB3BP20337 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RAB3BP20337 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB3BP20337 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
RAB3BP20337 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RAB3BP20337 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB3BP20337 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
RAB3BP20337 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RAB3BP20337 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RAB3BP20337 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
RAB3BP20337 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB3BP20337 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RAB3BP20337 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB3BP20337 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB3BP20337 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.28□□□□□ -0.28
RAB3BP20337 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB3BP20337 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.28□□□□□ -0.28
RAB3BP20337 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.28□□□□□ -0.28
RAB3BP20337 AC091812.2-201ENST00000619081 385 ntBASIC13.28□□□□□ -0.28
RAB3BP20337 AL691432.3-201ENST00000621860 400 ntBASIC13.28□□□□□ -0.28
RAB3BP20337 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB3BP20337 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RAB3BP20337 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB3BP20337 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB3BP20337 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms