Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH1P12830 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH1P12830 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CDH1P12830 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CDH1P12830 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.75□□□□□ -0.05
CDH1P12830 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 AL157414.3-201ENST00000624276 1954 ntBASIC14.75□□□□□ -0.05
CDH1P12830 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
CDH1P12830 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
CDH1P12830 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH1P12830 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CDH1P12830 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH1P12830 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH1P12830 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.75□□□□□ -0.05
CDH1P12830 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH1P12830 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.75□□□□□ -0.05
CDH1P12830 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH1P12830 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH1P12830 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.75□□□□□ -0.05
CDH1P12830 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH1P12830 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CDH1P12830 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH1P12830 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CDH1P12830 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH1P12830 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH1P12830 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CDH1P12830 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH1P12830 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH1P12830 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH1P12830 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH1P12830 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CDH1P12830 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CDH1P12830 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDH1P12830 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDH1P12830 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH1P12830 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH1P12830 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
CDH1P12830 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH1P12830 AL360270.3-201ENST00000609118 1348 ntBASIC14.74□□□□□ -0.05
CDH1P12830 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CDH1P12830 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CDH1P12830 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH1P12830 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH1P12830 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH1P12830 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.74□□□□□ -0.05
CDH1P12830 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH1P12830 AL162726.2-201ENST00000438986 1017 ntBASIC14.74□□□□□ -0.05
CDH1P12830 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH1P12830 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.74□□□□□ -0.05
CDH1P12830 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH1P12830 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH1P12830 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.74□□□□□ -0.05
CDH1P12830 CU634019.7-201ENST00000624153 1185 ntBASIC14.74□□□□□ -0.05
CDH1P12830 FP236241.2-201ENST00000624906 1185 ntBASIC14.74□□□□□ -0.05
CDH1P12830 AC025048.6-201ENST00000634326 1161 ntBASIC14.74□□□□□ -0.05
CDH1P12830 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CDH1P12830 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDH1P12830 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH1P12830 ACE3P-201ENST00000423435 1973 ntBASIC14.74□□□□□ -0.05
CDH1P12830 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH1P12830 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms