Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RARAP10276 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.86■□□□□ 0.13
RARAP10276 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.86■□□□□ 0.13
RARAP10276 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.86■□□□□ 0.13
RARAP10276 AL359711.2-201ENST00000563105 872 ntBASIC15.86■□□□□ 0.13
RARAP10276 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.86■□□□□ 0.13
RARAP10276 AC004233.3-201ENST00000607794 1269 ntBASIC15.86■□□□□ 0.13
RARAP10276 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.86■□□□□ 0.13
RARAP10276 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.86■□□□□ 0.13
RARAP10276 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RARAP10276 AC008761.3-201ENST00000624803 892 ntBASIC15.86■□□□□ 0.13
RARAP10276 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RARAP10276 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RARAP10276 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RARAP10276 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RARAP10276 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.86■□□□□ 0.13
RARAP10276 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.86■□□□□ 0.13
RARAP10276 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RARAP10276 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.86■□□□□ 0.13
RARAP10276 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RARAP10276 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RARAP10276 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
RARAP10276 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RARAP10276 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RARAP10276 AL391825.1-201ENST00000457671 1364 ntBASIC15.86■□□□□ 0.13
RARAP10276 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RARAP10276 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RARAP10276 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RARAP10276 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RARAP10276 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RARAP10276 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RARAP10276 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.85■□□□□ 0.13
RARAP10276 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.85■□□□□ 0.13
RARAP10276 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RARAP10276 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.85■□□□□ 0.13
RARAP10276 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.85■□□□□ 0.13
RARAP10276 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.85■□□□□ 0.13
RARAP10276 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.85■□□□□ 0.13
RARAP10276 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RARAP10276 AL137783.1-201ENST00000623494 1896 ntBASIC15.85■□□□□ 0.13
RARAP10276 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.85■□□□□ 0.13
RARAP10276 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.85■□□□□ 0.13
RARAP10276 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.85■□□□□ 0.13
RARAP10276 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 C1QBPP1-201ENST00000400117 770 ntBASIC15.85■□□□□ 0.13
RARAP10276 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.85■□□□□ 0.13
RARAP10276 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.85■□□□□ 0.13
RARAP10276 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.85■□□□□ 0.13
RARAP10276 AC124283.3-201ENST00000570869 594 ntBASIC15.85■□□□□ 0.13
RARAP10276 SPDYE22P-201ENST00000582158 798 ntBASIC15.85■□□□□ 0.13
RARAP10276 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.85■□□□□ 0.13
RARAP10276 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RARAP10276 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.85■□□□□ 0.13
RARAP10276 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RARAP10276 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.85■□□□□ 0.13
RARAP10276 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.85■□□□□ 0.13
RARAP10276 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RARAP10276 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 KRT8P22-201ENST00000562317 1415 ntBASIC15.85■□□□□ 0.13
RARAP10276 AC015802.1-201ENST00000588104 1449 ntBASIC15.85■□□□□ 0.13
RARAP10276 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RARAP10276 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RARAP10276 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RARAP10276 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RARAP10276 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RARAP10276 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.84■□□□□ 0.13
RARAP10276 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RARAP10276 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RARAP10276 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RARAP10276 OR2I1P-210ENST00000642037 4691 ntBASIC15.84■□□□□ 0.13
RARAP10276 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RARAP10276 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RARAP10276 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RARAP10276 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RARAP10276 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RARAP10276 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RARAP10276 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms