Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMIGD3P0DMS9 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TMIGD3P0DMS9 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TMIGD3P0DMS9 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TMIGD3P0DMS9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.73□□□□□ -0.21
TMIGD3P0DMS9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMIGD3P0DMS9 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMIGD3P0DMS9 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.73□□□□□ -0.21
TMIGD3P0DMS9 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMIGD3P0DMS9 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.73□□□□□ -0.21
TMIGD3P0DMS9 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TMIGD3P0DMS9 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMIGD3P0DMS9 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMIGD3P0DMS9 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 AC093525.8-201ENST00000624099 1342 ntBASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 AC025181.2-201ENST00000606994 802 ntBASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 AL033527.4-201ENST00000641026 673 ntBASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TMIGD3P0DMS9 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 AC099336.1-201ENST00000417053 1171 ntBASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 FAM21FP-201ENST00000426241 1131 ntBASIC13.71□□□□□ -0.21
TMIGD3P0DMS9 FO681548.1-201ENST00000455617 1132 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms