Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.54□□□□□ -0.08
SP9P0CG40 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SP9P0CG40 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SP9P0CG40 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SP9P0CG40 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SP9P0CG40 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SP9P0CG40 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.53□□□□□ -0.08
SP9P0CG40 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.53□□□□□ -0.08
SP9P0CG40 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SP9P0CG40 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.53□□□□□ -0.08
SP9P0CG40 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.53□□□□□ -0.08
SP9P0CG40 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SP9P0CG40 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 AC006372.4-201ENST00000624122 1543 ntBASIC14.53□□□□□ -0.08
SP9P0CG40 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.53□□□□□ -0.08
SP9P0CG40 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC14.53□□□□□ -0.08
SP9P0CG40 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.53□□□□□ -0.08
SP9P0CG40 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.53□□□□□ -0.08
SP9P0CG40 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 MIR1301-201ENST00000408518 82 ntBASIC14.53□□□□□ -0.08
SP9P0CG40 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC14.53□□□□□ -0.08
SP9P0CG40 HLA-DPA2-205ENST00000433582 733 ntBASIC14.53□□□□□ -0.08
SP9P0CG40 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14.53□□□□□ -0.08
SP9P0CG40 AC018638.5-201ENST00000450885 754 ntBASIC14.53□□□□□ -0.08
SP9P0CG40 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC14.53□□□□□ -0.08
SP9P0CG40 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SP9P0CG40 RN7SL582P-201ENST00000491078 279 ntBASIC14.53□□□□□ -0.08
SP9P0CG40 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC14.53□□□□□ -0.08
SP9P0CG40 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC14.53□□□□□ -0.08
SP9P0CG40 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 SRP14-204ENST00000558720 780 ntTSL 2 BASIC14.53□□□□□ -0.08
SP9P0CG40 GOLGA2P7-209ENST00000560408 745 ntBASIC14.53□□□□□ -0.08
SP9P0CG40 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.53□□□□□ -0.08
SP9P0CG40 AC010976.2-201ENST00000609697 852 ntBASIC14.53□□□□□ -0.08
SP9P0CG40 AC006483.2-201ENST00000609813 515 ntBASIC14.53□□□□□ -0.08
SP9P0CG40 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.53□□□□□ -0.08
SP9P0CG40 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
SP9P0CG40 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.53□□□□□ -0.08
SP9P0CG40 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SP9P0CG40 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SP9P0CG40 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SP9P0CG40 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SP9P0CG40 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SP9P0CG40 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SP9P0CG40 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SP9P0CG40 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SP9P0CG40 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SP9P0CG40 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SP9P0CG40 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SP9P0CG40 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SP9P0CG40 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SP9P0CG40 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SP9P0CG40 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.52□□□□□ -0.08
SP9P0CG40 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SP9P0CG40 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SP9P0CG40 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SP9P0CG40 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14.52□□□□□ -0.09
SP9P0CG40 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SP9P0CG40 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.52□□□□□ -0.09
SP9P0CG40 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC14.52□□□□□ -0.09
SP9P0CG40 AC093826.1-201ENST00000508655 993 ntBASIC14.52□□□□□ -0.09
SP9P0CG40 AC106047.2-201ENST00000511723 743 ntBASIC14.52□□□□□ -0.09
SP9P0CG40 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC14.52□□□□□ -0.09
SP9P0CG40 RNA5SP406-201ENST00000516106 112 ntBASIC14.52□□□□□ -0.09
SP9P0CG40 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC14.52□□□□□ -0.09
SP9P0CG40 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC14.52□□□□□ -0.09
SP9P0CG40 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC14.52□□□□□ -0.09
SP9P0CG40 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC14.52□□□□□ -0.09
SP9P0CG40 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SP9P0CG40 AL118522.1-201ENST00000611368 560 ntBASIC14.52□□□□□ -0.09
SP9P0CG40 PTPN20CP-201ENST00000614090 920 ntBASIC14.52□□□□□ -0.09
SP9P0CG40 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SP9P0CG40 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SP9P0CG40 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SP9P0CG40 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SP9P0CG40 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SP9P0CG40 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SP9P0CG40 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.52□□□□□ -0.09
SP9P0CG40 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SP9P0CG40 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SP9P0CG40 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SP9P0CG40 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SP9P0CG40 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms