Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CTSDP07339 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CTSDP07339 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CTSDP07339 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.58□□□□□ -0.4
CTSDP07339 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
CTSDP07339 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 ACTG1P14-201ENST00000446382 1122 ntBASIC12.58□□□□□ -0.4
CTSDP07339 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.58□□□□□ -0.4
CTSDP07339 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.58□□□□□ -0.4
CTSDP07339 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.58□□□□□ -0.4
CTSDP07339 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.58□□□□□ -0.4
CTSDP07339 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.58□□□□□ -0.4
CTSDP07339 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.58□□□□□ -0.4
CTSDP07339 RN7SL828P-201ENST00000607615 303 ntBASIC12.58□□□□□ -0.4
CTSDP07339 MIR6069-201ENST00000620069 79 ntBASIC12.58□□□□□ -0.4
CTSDP07339 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.58□□□□□ -0.4
CTSDP07339 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CTSDP07339 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CTSDP07339 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.58□□□□□ -0.4
CTSDP07339 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.58□□□□□ -0.4
CTSDP07339 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
CTSDP07339 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CTSDP07339 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 AC090505.1-201ENST00000430515 1834 ntBASIC12.58□□□□□ -0.4
CTSDP07339 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
CTSDP07339 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.57□□□□□ -0.4
CTSDP07339 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CTSDP07339 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.57□□□□□ -0.4
CTSDP07339 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.57□□□□□ -0.4
CTSDP07339 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CTSDP07339 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSDP07339 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSDP07339 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.57□□□□□ -0.4
CTSDP07339 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSDP07339 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CTSDP07339 AL035456.1-201ENST00000456064 1369 ntBASIC12.57□□□□□ -0.4
CTSDP07339 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CTSDP07339 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSDP07339 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSDP07339 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CTSDP07339 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSDP07339 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSDP07339 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSDP07339 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CTSDP07339 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSDP07339 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.57□□□□□ -0.4
CTSDP07339 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.57□□□□□ -0.4
CTSDP07339 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.57□□□□□ -0.4
CTSDP07339 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.57□□□□□ -0.4
CTSDP07339 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.57□□□□□ -0.4
CTSDP07339 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.57□□□□□ -0.4
CTSDP07339 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.57□□□□□ -0.4
CTSDP07339 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSDP07339 ALG1L8P-201ENST00000533887 760 ntBASIC12.57□□□□□ -0.4
CTSDP07339 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CTSDP07339 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.57□□□□□ -0.4
CTSDP07339 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.57□□□□□ -0.4
CTSDP07339 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.57□□□□□ -0.4
CTSDP07339 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.57□□□□□ -0.4
CTSDP07339 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
CTSDP07339 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.57□□□□□ -0.4
CTSDP07339 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.57□□□□□ -0.4
CTSDP07339 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSDP07339 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSDP07339 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.57□□□□□ -0.4
CTSDP07339 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTSDP07339 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTSDP07339 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CTSDP07339 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.57□□□□□ -0.4
CTSDP07339 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSDP07339 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTSDP07339 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CTSDP07339 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.56□□□□□ -0.4
CTSDP07339 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.56□□□□□ -0.4
CTSDP07339 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.56□□□□□ -0.4
CTSDP07339 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.56□□□□□ -0.4
CTSDP07339 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CTSDP07339 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.56□□□□□ -0.4
CTSDP07339 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
CTSDP07339 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CTSDP07339 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms