Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CAPNS1P04632 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.05■□□□□ 0
CAPNS1P04632 ZBED1P1-201ENST00000502364 1930 ntBASIC15.05■□□□□ 0
CAPNS1P04632 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CAPNS1P04632 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CAPNS1P04632 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ 0
CAPNS1P04632 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.05■□□□□ 0
CAPNS1P04632 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.05■□□□□ 0
CAPNS1P04632 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CAPNS1P04632 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CAPNS1P04632 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CAPNS1P04632 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
CAPNS1P04632 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.05■□□□□ -0
CAPNS1P04632 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.05■□□□□ -0
CAPNS1P04632 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.05■□□□□ -0
CAPNS1P04632 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.05■□□□□ -0
CAPNS1P04632 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.05■□□□□ -0
CAPNS1P04632 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.05■□□□□ -0
CAPNS1P04632 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CAPNS1P04632 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CAPNS1P04632 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CAPNS1P04632 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.05■□□□□ -0
CAPNS1P04632 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.05■□□□□ -0
CAPNS1P04632 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
CAPNS1P04632 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.05■□□□□ -0
CAPNS1P04632 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.05■□□□□ -0
CAPNS1P04632 SOCS2P1-201ENST00000417727 557 ntBASIC15.05■□□□□ -0
CAPNS1P04632 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.05■□□□□ -0
CAPNS1P04632 AC245100.5-201ENST00000452108 331 ntBASIC15.05■□□□□ -0
CAPNS1P04632 IMP3P2-201ENST00000489760 475 ntBASIC15.05■□□□□ -0
CAPNS1P04632 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.05■□□□□ -0
CAPNS1P04632 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.05■□□□□ -0
CAPNS1P04632 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.05■□□□□ -0
CAPNS1P04632 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.05■□□□□ -0
CAPNS1P04632 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.05■□□□□ -0
CAPNS1P04632 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
CAPNS1P04632 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.05■□□□□ -0
CAPNS1P04632 AC097724.1-201ENST00000609581 426 ntBASIC15.05■□□□□ -0
CAPNS1P04632 MIR7845-201ENST00000618396 99 ntBASIC15.05■□□□□ -0
CAPNS1P04632 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
CAPNS1P04632 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.05■□□□□ -0
CAPNS1P04632 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.05■□□□□ -0
CAPNS1P04632 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.05■□□□□ -0
CAPNS1P04632 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.05■□□□□ -0
CAPNS1P04632 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CAPNS1P04632 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
CAPNS1P04632 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CAPNS1P04632 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.05■□□□□ -0
CAPNS1P04632 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CAPNS1P04632 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CAPNS1P04632 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CAPNS1P04632 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CAPNS1P04632 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CAPNS1P04632 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.04■□□□□ -0
CAPNS1P04632 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CAPNS1P04632 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.04■□□□□ -0
CAPNS1P04632 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.04■□□□□ -0
CAPNS1P04632 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.04■□□□□ -0
CAPNS1P04632 INTS4P2-202ENST00000614726 2019 ntBASIC15.04■□□□□ -0
CAPNS1P04632 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.04■□□□□ -0
CAPNS1P04632 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.04■□□□□ -0
CAPNS1P04632 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.04■□□□□ -0
CAPNS1P04632 NORAD-201ENST00000565493 5339 ntBASIC15.04■□□□□ -0
CAPNS1P04632 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPNS1P04632 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPNS1P04632 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.04■□□□□ -0
CAPNS1P04632 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.04■□□□□ -0
CAPNS1P04632 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CAPNS1P04632 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.04■□□□□ -0
CAPNS1P04632 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.04■□□□□ -0
CAPNS1P04632 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.04■□□□□ -0
CAPNS1P04632 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.04■□□□□ -0
CAPNS1P04632 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.04■□□□□ -0
CAPNS1P04632 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CAPNS1P04632 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.04■□□□□ -0
CAPNS1P04632 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.04■□□□□ -0
CAPNS1P04632 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.04■□□□□ -0
CAPNS1P04632 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.04■□□□□ -0
CAPNS1P04632 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CAPNS1P04632 AC020914.3-201ENST00000594712 304 ntBASIC15.04■□□□□ -0
CAPNS1P04632 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.04■□□□□ -0
CAPNS1P04632 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.04■□□□□ -0
CAPNS1P04632 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPNS1P04632 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPNS1P04632 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CAPNS1P04632 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.04■□□□□ -0
CAPNS1P04632 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CAPNS1P04632 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CAPNS1P04632 AC005252.3-201ENST00000623855 2258 ntBASIC15.04■□□□□ -0
CAPNS1P04632 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPNS1P04632 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPNS1P04632 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPNS1P04632 AC136759.1-202ENST00000530858 2194 ntBASIC15.04■□□□□ -0
CAPNS1P04632 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.04■□□□□ -0
CAPNS1P04632 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.04■□□□□ -0
CAPNS1P04632 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms