Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CD74P04233 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.72□□□□□ -0.37
CD74P04233 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
CD74P04233 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CD74P04233 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CD74P04233 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD74P04233 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CD74P04233 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD74P04233 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CD74P04233 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.71□□□□□ -0.37
CD74P04233 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CD74P04233 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CD74P04233 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.71□□□□□ -0.37
CD74P04233 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.71□□□□□ -0.37
CD74P04233 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CD74P04233 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CD74P04233 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.71□□□□□ -0.37
CD74P04233 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
CD74P04233 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD74P04233 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CD74P04233 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD74P04233 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.71□□□□□ -0.37
CD74P04233 RPL13P2-201ENST00000440687 659 ntBASIC12.71□□□□□ -0.37
CD74P04233 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CD74P04233 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.71□□□□□ -0.37
CD74P04233 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.71□□□□□ -0.37
CD74P04233 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CD74P04233 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.71□□□□□ -0.37
CD74P04233 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.71□□□□□ -0.37
CD74P04233 AC104692.2-201ENST00000603054 253 ntBASIC12.71□□□□□ -0.37
CD74P04233 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.71□□□□□ -0.37
CD74P04233 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.71□□□□□ -0.37
CD74P04233 AC055717.3-201ENST00000622967 595 ntBASIC12.71□□□□□ -0.37
CD74P04233 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.71□□□□□ -0.37
CD74P04233 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.71□□□□□ -0.37
CD74P04233 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD74P04233 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CD74P04233 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD74P04233 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD74P04233 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD74P04233 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.71□□□□□ -0.38
CD74P04233 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD74P04233 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
CD74P04233 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD74P04233 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.71□□□□□ -0.38
CD74P04233 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD74P04233 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD74P04233 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.71□□□□□ -0.38
CD74P04233 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CD74P04233 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
CD74P04233 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD74P04233 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.7□□□□□ -0.38
CD74P04233 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
CD74P04233 AL157414.3-201ENST00000624276 1954 ntBASIC12.7□□□□□ -0.38
CD74P04233 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CD74P04233 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD74P04233 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.7□□□□□ -0.38
CD74P04233 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD74P04233 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.7□□□□□ -0.38
CD74P04233 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.7□□□□□ -0.38
CD74P04233 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD74P04233 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CD74P04233 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD74P04233 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD74P04233 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD74P04233 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD74P04233 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD74P04233 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD74P04233 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD74P04233 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.7□□□□□ -0.38
CD74P04233 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD74P04233 TOMM22P5-201ENST00000416399 439 ntBASIC12.7□□□□□ -0.38
CD74P04233 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.7□□□□□ -0.38
CD74P04233 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.7□□□□□ -0.38
CD74P04233 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.7□□□□□ -0.38
CD74P04233 AC069335.1-201ENST00000489972 472 ntBASIC12.7□□□□□ -0.38
CD74P04233 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.7□□□□□ -0.38
CD74P04233 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.7□□□□□ -0.38
CD74P04233 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.7□□□□□ -0.38
CD74P04233 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.7□□□□□ -0.38
CD74P04233 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.7□□□□□ -0.38
CD74P04233 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD74P04233 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.7□□□□□ -0.38
CD74P04233 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.7□□□□□ -0.38
CD74P04233 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD74P04233 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD74P04233 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CD74P04233 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CD74P04233 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms