Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.24■□□□□ 0.19
CHRNA1P02708 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRNA1P02708 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CHRNA1P02708 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CHRNA1P02708 AC007292.2-201ENST00000593524 1812 ntBASIC16.24■□□□□ 0.19
CHRNA1P02708 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRNA1P02708 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.24■□□□□ 0.19
CHRNA1P02708 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRNA1P02708 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.24■□□□□ 0.19
CHRNA1P02708 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CHRNA1P02708 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.24■□□□□ 0.19
CHRNA1P02708 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.24■□□□□ 0.19
CHRNA1P02708 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.24■□□□□ 0.19
CHRNA1P02708 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.24■□□□□ 0.19
CHRNA1P02708 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.24■□□□□ 0.19
CHRNA1P02708 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.24■□□□□ 0.19
CHRNA1P02708 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRNA1P02708 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.24■□□□□ 0.19
CHRNA1P02708 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.24■□□□□ 0.19
CHRNA1P02708 AC006453.1-201ENST00000636037 1257 ntBASIC16.24■□□□□ 0.19
CHRNA1P02708 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CHRNA1P02708 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.24■□□□□ 0.19
CHRNA1P02708 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.24■□□□□ 0.19
CHRNA1P02708 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.24■□□□□ 0.19
CHRNA1P02708 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.24■□□□□ 0.19
CHRNA1P02708 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRNA1P02708 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHRNA1P02708 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CHRNA1P02708 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CHRNA1P02708 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CHRNA1P02708 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.23■□□□□ 0.19
CHRNA1P02708 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 AC078875.1-201ENST00000431907 724 ntBASIC16.23■□□□□ 0.19
CHRNA1P02708 AL645933.1-201ENST00000440087 609 ntBASIC16.23■□□□□ 0.19
CHRNA1P02708 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.23■□□□□ 0.19
CHRNA1P02708 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.23■□□□□ 0.19
CHRNA1P02708 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CHRNA1P02708 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.23■□□□□ 0.19
CHRNA1P02708 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.23■□□□□ 0.19
CHRNA1P02708 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.23■□□□□ 0.19
CHRNA1P02708 MIR4754-201ENST00000582477 89 ntBASIC16.23■□□□□ 0.19
CHRNA1P02708 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.23■□□□□ 0.19
CHRNA1P02708 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 WASH3P-207ENST00000560956 1394 ntBASIC16.23■□□□□ 0.19
CHRNA1P02708 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.23■□□□□ 0.19
CHRNA1P02708 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CHRNA1P02708 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHRNA1P02708 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CHRNA1P02708 AC006480.2-201ENST00000609770 1337 ntBASIC16.22■□□□□ 0.19
CHRNA1P02708 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHRNA1P02708 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHRNA1P02708 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHRNA1P02708 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHRNA1P02708 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHRNA1P02708 AC144522.1-201ENST00000625111 1658 ntBASIC16.22■□□□□ 0.19
CHRNA1P02708 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CHRNA1P02708 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.22■□□□□ 0.19
CHRNA1P02708 ZBED1P1-201ENST00000502364 1930 ntBASIC16.22■□□□□ 0.19
CHRNA1P02708 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHRNA1P02708 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHRNA1P02708 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHRNA1P02708 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.22■□□□□ 0.19
CHRNA1P02708 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.22■□□□□ 0.19
CHRNA1P02708 AC069218.1-201ENST00000435269 762 ntBASIC16.22■□□□□ 0.19
CHRNA1P02708 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms