Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RFPL1O75677 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RFPL1O75677 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RFPL1O75677 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.17■□□□□ 0.02
RFPL1O75677 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.17■□□□□ 0.02
RFPL1O75677 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RFPL1O75677 RN7SL752P-201ENST00000463779 287 ntBASIC15.17■□□□□ 0.02
RFPL1O75677 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.17■□□□□ 0.02
RFPL1O75677 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.17■□□□□ 0.02
RFPL1O75677 AC093004.1-201ENST00000508850 424 ntBASIC15.17■□□□□ 0.02
RFPL1O75677 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.17■□□□□ 0.02
RFPL1O75677 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RFPL1O75677 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.17■□□□□ 0.02
RFPL1O75677 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.17■□□□□ 0.02
RFPL1O75677 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.17■□□□□ 0.02
RFPL1O75677 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RFPL1O75677 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
RFPL1O75677 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.17■□□□□ 0.02
RFPL1O75677 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
RFPL1O75677 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RFPL1O75677 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.17■□□□□ 0.02
RFPL1O75677 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.17■□□□□ 0.02
RFPL1O75677 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RFPL1O75677 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFPL1O75677 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.17■□□□□ 0.02
RFPL1O75677 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFPL1O75677 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.16■□□□□ 0.02
RFPL1O75677 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFPL1O75677 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFPL1O75677 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFPL1O75677 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.16■□□□□ 0.02
RFPL1O75677 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFPL1O75677 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFPL1O75677 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.16■□□□□ 0.02
RFPL1O75677 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFPL1O75677 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.16■□□□□ 0.02
RFPL1O75677 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.16■□□□□ 0.02
RFPL1O75677 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFPL1O75677 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFPL1O75677 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.16■□□□□ 0.02
RFPL1O75677 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFPL1O75677 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFPL1O75677 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.16■□□□□ 0.02
RFPL1O75677 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.16■□□□□ 0.02
RFPL1O75677 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.16■□□□□ 0.02
RFPL1O75677 INE1-201ENST00000456273 945 ntBASIC15.16■□□□□ 0.02
RFPL1O75677 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.16■□□□□ 0.02
RFPL1O75677 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.16■□□□□ 0.02
RFPL1O75677 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.16■□□□□ 0.02
RFPL1O75677 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFPL1O75677 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.16■□□□□ 0.02
RFPL1O75677 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.16■□□□□ 0.02
RFPL1O75677 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFPL1O75677 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RFPL1O75677 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFPL1O75677 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.16■□□□□ 0.02
RFPL1O75677 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.16■□□□□ 0.02
RFPL1O75677 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.16■□□□□ 0.02
RFPL1O75677 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RFPL1O75677 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RFPL1O75677 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RFPL1O75677 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFPL1O75677 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.16■□□□□ 0.02
RFPL1O75677 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.16■□□□□ 0.02
RFPL1O75677 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFPL1O75677 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFPL1O75677 AC010327.5-201ENST00000586923 3061 ntBASIC15.15■□□□□ 0.02
RFPL1O75677 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.15■□□□□ 0.02
RFPL1O75677 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RFPL1O75677 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.15■□□□□ 0.02
RFPL1O75677 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RFPL1O75677 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RFPL1O75677 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 AC018665.1-201ENST00000622927 1362 ntBASIC15.15■□□□□ 0.02
RFPL1O75677 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.15■□□□□ 0.02
RFPL1O75677 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.15■□□□□ 0.02
RFPL1O75677 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms