Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC3O60481 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC3O60481 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
ZIC3O60481 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC3O60481 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.53□□□□□ -0.24
ZIC3O60481 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC3O60481 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ZIC3O60481 LINC01101-201ENST00000622953 1884 ntBASIC13.53□□□□□ -0.24
ZIC3O60481 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC3O60481 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
ZIC3O60481 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC3O60481 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC3O60481 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.53□□□□□ -0.24
ZIC3O60481 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ZIC3O60481 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
ZIC3O60481 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC3O60481 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC3O60481 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.53□□□□□ -0.24
ZIC3O60481 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC3O60481 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.53□□□□□ -0.24
ZIC3O60481 RPL13AP20-201ENST00000459725 609 ntBASIC13.53□□□□□ -0.24
ZIC3O60481 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC3O60481 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.53□□□□□ -0.24
ZIC3O60481 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.53□□□□□ -0.24
ZIC3O60481 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
ZIC3O60481 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC3O60481 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.53□□□□□ -0.24
ZIC3O60481 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.53□□□□□ -0.24
ZIC3O60481 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.53□□□□□ -0.24
ZIC3O60481 RN7SL560P-201ENST00000577943 264 ntBASIC13.53□□□□□ -0.24
ZIC3O60481 MIR4683-201ENST00000579659 81 ntBASIC13.53□□□□□ -0.24
ZIC3O60481 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.53□□□□□ -0.24
ZIC3O60481 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC3O60481 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.53□□□□□ -0.24
ZIC3O60481 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC3O60481 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.53□□□□□ -0.24
ZIC3O60481 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.53□□□□□ -0.24
ZIC3O60481 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC3O60481 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.53□□□□□ -0.24
ZIC3O60481 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC3O60481 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ZIC3O60481 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC3O60481 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ZIC3O60481 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.53□□□□□ -0.24
ZIC3O60481 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ZIC3O60481 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZIC3O60481 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
ZIC3O60481 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZIC3O60481 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ZIC3O60481 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZIC3O60481 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZIC3O60481 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZIC3O60481 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.52□□□□□ -0.24
ZIC3O60481 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZIC3O60481 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ZIC3O60481 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
ZIC3O60481 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZIC3O60481 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZIC3O60481 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
ZIC3O60481 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
ZIC3O60481 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
ZIC3O60481 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZIC3O60481 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ZIC3O60481 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC3O60481 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC3O60481 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.52□□□□□ -0.25
ZIC3O60481 AL136309.1-201ENST00000403917 691 ntBASIC13.52□□□□□ -0.25
ZIC3O60481 MIR1908-201ENST00000410394 80 ntBASIC13.52□□□□□ -0.25
ZIC3O60481 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.52□□□□□ -0.25
ZIC3O60481 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC3O60481 AL355994.2-201ENST00000447882 704 ntBASIC13.52□□□□□ -0.25
ZIC3O60481 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.52□□□□□ -0.25
ZIC3O60481 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.52□□□□□ -0.25
ZIC3O60481 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC3O60481 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC3O60481 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
ZIC3O60481 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.52□□□□□ -0.25
ZIC3O60481 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.52□□□□□ -0.25
ZIC3O60481 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.52□□□□□ -0.25
ZIC3O60481 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.52□□□□□ -0.25
ZIC3O60481 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.52□□□□□ -0.25
ZIC3O60481 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.52□□□□□ -0.25
ZIC3O60481 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.52□□□□□ -0.25
ZIC3O60481 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC3O60481 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC3O60481 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.52□□□□□ -0.25
ZIC3O60481 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.52□□□□□ -0.25
ZIC3O60481 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC3O60481 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC3O60481 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC3O60481 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC3O60481 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.52□□□□□ -0.25
ZIC3O60481 AL023775.1-201ENST00000454907 1746 ntBASIC13.52□□□□□ -0.25
ZIC3O60481 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC3O60481 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ZIC3O60481 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC3O60481 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.52□□□□□ -0.25
ZIC3O60481 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.52□□□□□ -0.25
ZIC3O60481 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
ZIC3O60481 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms