Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
EXTL3O43909 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
EXTL3O43909 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
EXTL3O43909 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
EXTL3O43909 RN7SKP230-201ENST00000365642 335 ntBASIC16.33■□□□□ 0.2
EXTL3O43909 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EXTL3O43909 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EXTL3O43909 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
EXTL3O43909 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EXTL3O43909 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.33■□□□□ 0.2
EXTL3O43909 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.33■□□□□ 0.2
EXTL3O43909 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
EXTL3O43909 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.33■□□□□ 0.2
EXTL3O43909 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EXTL3O43909 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.33■□□□□ 0.2
EXTL3O43909 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.33■□□□□ 0.2
EXTL3O43909 AC106820.3-201ENST00000561653 397 ntBASIC16.33■□□□□ 0.2
EXTL3O43909 AP005482.1-201ENST00000563722 1273 ntBASIC16.33■□□□□ 0.2
EXTL3O43909 AC138696.2-201ENST00000607376 223 ntBASIC16.33■□□□□ 0.2
EXTL3O43909 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
EXTL3O43909 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EXTL3O43909 FKBP4P6-201ENST00000457486 1332 ntBASIC16.33■□□□□ 0.2
EXTL3O43909 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
EXTL3O43909 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
EXTL3O43909 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EXTL3O43909 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EXTL3O43909 SALL4P5-201ENST00000419001 1760 ntBASIC16.33■□□□□ 0.2
EXTL3O43909 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
EXTL3O43909 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EXTL3O43909 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
EXTL3O43909 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EXTL3O43909 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.33■□□□□ 0.2
EXTL3O43909 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
EXTL3O43909 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.33■□□□□ 0.2
EXTL3O43909 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EXTL3O43909 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
EXTL3O43909 CICP24-201ENST00000605464 2705 ntBASIC16.32■□□□□ 0.2
EXTL3O43909 CICP14-201ENST00000629111 2732 ntBASIC16.32■□□□□ 0.2
EXTL3O43909 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.32■□□□□ 0.2
EXTL3O43909 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
EXTL3O43909 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
EXTL3O43909 AC018529.2-202ENST00000611482 3087 ntBASIC16.32■□□□□ 0.2
EXTL3O43909 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.32■□□□□ 0.2
EXTL3O43909 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EXTL3O43909 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EXTL3O43909 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EXTL3O43909 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
EXTL3O43909 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EXTL3O43909 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EXTL3O43909 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EXTL3O43909 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EXTL3O43909 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
EXTL3O43909 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EXTL3O43909 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.32■□□□□ 0.2
EXTL3O43909 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.32■□□□□ 0.2
EXTL3O43909 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.32■□□□□ 0.2
EXTL3O43909 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EXTL3O43909 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.32■□□□□ 0.2
EXTL3O43909 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EXTL3O43909 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EXTL3O43909 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.32■□□□□ 0.2
EXTL3O43909 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.32■□□□□ 0.2
EXTL3O43909 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.32■□□□□ 0.2
EXTL3O43909 FAM8A4P-201ENST00000435433 1213 ntBASIC16.32■□□□□ 0.2
EXTL3O43909 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.32■□□□□ 0.2
EXTL3O43909 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.32■□□□□ 0.2
EXTL3O43909 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EXTL3O43909 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
EXTL3O43909 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.32■□□□□ 0.2
EXTL3O43909 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
EXTL3O43909 AL606495.2-201ENST00000605867 535 ntBASIC16.32■□□□□ 0.2
EXTL3O43909 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.32■□□□□ 0.2
EXTL3O43909 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EXTL3O43909 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EXTL3O43909 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
EXTL3O43909 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.32■□□□□ 0.2
EXTL3O43909 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EXTL3O43909 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
EXTL3O43909 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.31■□□□□ 0.2
EXTL3O43909 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.31■□□□□ 0.2
EXTL3O43909 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.31■□□□□ 0.2
EXTL3O43909 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
EXTL3O43909 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.31■□□□□ 0.2
EXTL3O43909 AL354989.2-201ENST00000435838 1540 ntBASIC16.31■□□□□ 0.2
EXTL3O43909 AC011840.2-201ENST00000563063 1520 ntBASIC16.31■□□□□ 0.2
EXTL3O43909 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.31■□□□□ 0.2
EXTL3O43909 AL596257.1-201ENST00000641463 2694 ntBASIC16.31■□□□□ 0.2
EXTL3O43909 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.31■□□□□ 0.2
EXTL3O43909 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms