Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1AO00322 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
UPK1AO00322 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1AO00322 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
UPK1AO00322 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.32□□□□□ -0.12
UPK1AO00322 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.32□□□□□ -0.12
UPK1AO00322 AC104596.2-201ENST00000512793 793 ntBASIC14.32□□□□□ -0.12
UPK1AO00322 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.32□□□□□ -0.12
UPK1AO00322 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.32□□□□□ -0.12
UPK1AO00322 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
UPK1AO00322 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1AO00322 RN7SL204P-201ENST00000582831 262 ntBASIC14.32□□□□□ -0.12
UPK1AO00322 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.32□□□□□ -0.12
UPK1AO00322 AL132655.2-201ENST00000596276 594 ntBASIC14.32□□□□□ -0.12
UPK1AO00322 AL355385.1-201ENST00000606123 409 ntBASIC14.32□□□□□ -0.12
UPK1AO00322 AC004233.3-201ENST00000607794 1269 ntBASIC14.32□□□□□ -0.12
UPK1AO00322 AC093726.1-201ENST00000608064 963 ntBASIC14.32□□□□□ -0.12
UPK1AO00322 AC008761.3-201ENST00000624803 892 ntBASIC14.32□□□□□ -0.12
UPK1AO00322 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1AO00322 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.32□□□□□ -0.12
UPK1AO00322 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
UPK1AO00322 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.32□□□□□ -0.12
UPK1AO00322 MST1P2-201ENST00000457982 2291 ntBASIC14.32□□□□□ -0.12
UPK1AO00322 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
UPK1AO00322 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1AO00322 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1AO00322 AC093525.8-201ENST00000624099 1342 ntBASIC14.32□□□□□ -0.12
UPK1AO00322 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1AO00322 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1AO00322 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1AO00322 AL391825.1-201ENST00000457671 1364 ntBASIC14.32□□□□□ -0.12
UPK1AO00322 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1AO00322 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1AO00322 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
UPK1AO00322 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1AO00322 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.32□□□□□ -0.12
UPK1AO00322 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UPK1AO00322 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UPK1AO00322 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
UPK1AO00322 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.31□□□□□ -0.12
UPK1AO00322 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 CICP17-201ENST00000418553 2377 ntBASIC14.31□□□□□ -0.12
UPK1AO00322 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.31□□□□□ -0.12
UPK1AO00322 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.31□□□□□ -0.12
UPK1AO00322 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
UPK1AO00322 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UPK1AO00322 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 AC236430.1-201ENST00000402231 743 ntBASIC14.31□□□□□ -0.12
UPK1AO00322 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.31□□□□□ -0.12
UPK1AO00322 AC098850.1-201ENST00000419919 790 ntBASIC14.31□□□□□ -0.12
UPK1AO00322 AL353779.1-201ENST00000434793 351 ntBASIC14.31□□□□□ -0.12
UPK1AO00322 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.31□□□□□ -0.12
UPK1AO00322 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.31□□□□□ -0.12
UPK1AO00322 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.31□□□□□ -0.12
UPK1AO00322 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.31□□□□□ -0.12
UPK1AO00322 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
UPK1AO00322 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 AL360270.3-201ENST00000609118 1348 ntBASIC14.31□□□□□ -0.12
UPK1AO00322 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UPK1AO00322 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
UPK1AO00322 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.31□□□□□ -0.12
UPK1AO00322 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.31□□□□□ -0.12
UPK1AO00322 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
UPK1AO00322 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UPK1AO00322 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1AO00322 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.31□□□□□ -0.12
UPK1AO00322 INTS4P2-202ENST00000614726 2019 ntBASIC14.31□□□□□ -0.12
UPK1AO00322 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
UPK1AO00322 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.3□□□□□ -0.12
UPK1AO00322 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.3□□□□□ -0.12
UPK1AO00322 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.3□□□□□ -0.12
UPK1AO00322 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
UPK1AO00322 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1AO00322 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms