Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
COLCA2A8K830 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
COLCA2A8K830 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
COLCA2A8K830 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.52□□□□□ -0.56
COLCA2A8K830 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
COLCA2A8K830 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
COLCA2A8K830 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
COLCA2A8K830 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC11.52□□□□□ -0.56
COLCA2A8K830 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
COLCA2A8K830 MARK2P9-201ENST00000430958 1727 ntBASIC11.52□□□□□ -0.56
COLCA2A8K830 AL445250.1-201ENST00000641671 2259 ntBASIC11.52□□□□□ -0.56
COLCA2A8K830 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC11.52□□□□□ -0.56
COLCA2A8K830 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
COLCA2A8K830 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
COLCA2A8K830 HSPA8P5-201ENST00000456928 2069 ntBASIC11.52□□□□□ -0.57
COLCA2A8K830 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC11.52□□□□□ -0.57
COLCA2A8K830 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
COLCA2A8K830 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
COLCA2A8K830 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
COLCA2A8K830 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
COLCA2A8K830 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
COLCA2A8K830 RN7SL606P-201ENST00000472779 293 ntBASIC11.52□□□□□ -0.57
COLCA2A8K830 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC11.52□□□□□ -0.57
COLCA2A8K830 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
COLCA2A8K830 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
COLCA2A8K830 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
COLCA2A8K830 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC11.52□□□□□ -0.57
COLCA2A8K830 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC11.52□□□□□ -0.57
COLCA2A8K830 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC11.52□□□□□ -0.57
COLCA2A8K830 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
COLCA2A8K830 SPEG-225ENST00000617028 815 ntTSL 5 BASIC11.52□□□□□ -0.57
COLCA2A8K830 DECR2-212ENST00000627716 352 ntTSL 2 BASIC11.52□□□□□ -0.57
COLCA2A8K830 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
COLCA2A8K830 AC009474.1-201ENST00000455096 1565 ntBASIC11.52□□□□□ -0.57
COLCA2A8K830 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
COLCA2A8K830 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
COLCA2A8K830 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
COLCA2A8K830 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.52□□□□□ -0.57
COLCA2A8K830 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
COLCA2A8K830 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC11.52□□□□□ -0.57
COLCA2A8K830 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
COLCA2A8K830 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
COLCA2A8K830 Z83836.1-201ENST00000624605 1642 ntBASIC11.52□□□□□ -0.57
COLCA2A8K830 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
COLCA2A8K830 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
COLCA2A8K830 LPP-AS2-201ENST00000605573 2852 ntBASIC11.52□□□□□ -0.57
COLCA2A8K830 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC11.52□□□□□ -0.57
COLCA2A8K830 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
COLCA2A8K830 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
COLCA2A8K830 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
COLCA2A8K830 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
COLCA2A8K830 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
COLCA2A8K830 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC11.52□□□□□ -0.57
COLCA2A8K830 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC11.52□□□□□ -0.57
COLCA2A8K830 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
COLCA2A8K830 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
COLCA2A8K830 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
COLCA2A8K830 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
COLCA2A8K830 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
COLCA2A8K830 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
COLCA2A8K830 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
COLCA2A8K830 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
COLCA2A8K830 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC11.51□□□□□ -0.57
COLCA2A8K830 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC11.51□□□□□ -0.57
COLCA2A8K830 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
COLCA2A8K830 MCU-204ENST00000536019 3224 ntTSL 2 BASIC11.51□□□□□ -0.57
COLCA2A8K830 AC010969.2-201ENST00000602458 3231 ntBASIC11.51□□□□□ -0.57
COLCA2A8K830 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
COLCA2A8K830 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC11.51□□□□□ -0.57
COLCA2A8K830 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC11.51□□□□□ -0.57
COLCA2A8K830 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
COLCA2A8K830 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC11.51□□□□□ -0.57
COLCA2A8K830 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
COLCA2A8K830 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
COLCA2A8K830 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
COLCA2A8K830 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
COLCA2A8K830 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
COLCA2A8K830 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
COLCA2A8K830 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.51□□□□□ -0.57
COLCA2A8K830 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
COLCA2A8K830 TSPY14P-201ENST00000303979 915 ntBASIC11.51□□□□□ -0.57
COLCA2A8K830 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC11.51□□□□□ -0.57
COLCA2A8K830 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
COLCA2A8K830 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
COLCA2A8K830 AC006970.2-201ENST00000450065 779 ntBASIC11.51□□□□□ -0.57
COLCA2A8K830 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC11.51□□□□□ -0.57
COLCA2A8K830 HS6ST1P1-201ENST00000481504 1234 ntBASIC11.51□□□□□ -0.57
COLCA2A8K830 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC11.51□□□□□ -0.57
COLCA2A8K830 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.51□□□□□ -0.57
COLCA2A8K830 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC11.51□□□□□ -0.57
COLCA2A8K830 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC11.51□□□□□ -0.57
COLCA2A8K830 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC11.51□□□□□ -0.57
COLCA2A8K830 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
COLCA2A8K830 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
COLCA2A8K830 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.51□□□□□ -0.57
COLCA2A8K830 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
COLCA2A8K830 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
COLCA2A8K830 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.51□□□□□ -0.57
COLCA2A8K830 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.51□□□□□ -0.57
COLCA2A8K830 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms