Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 REXO1L1P-201ENST00000379010 6598 ntBASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TRGV1A0A0A0MS02 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.02□□□□□ -0.64
TRGV1A0A0A0MS02 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
TRGV1A0A0A0MS02 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TRGV1A0A0A0MS02 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.02□□□□□ -0.64
TRGV1A0A0A0MS02 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
TRGV1A0A0A0MS02 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TRGV1A0A0A0MS02 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
TRGV1A0A0A0MS02 AC013726.1-201ENST00000563747 2285 ntBASIC11.02□□□□□ -0.64
TRGV1A0A0A0MS02 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC11.02□□□□□ -0.64
TRGV1A0A0A0MS02 REXO1L2P-201ENST00000425429 2069 ntBASIC11.02□□□□□ -0.64
TRGV1A0A0A0MS02 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.64
TRGV1A0A0A0MS02 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
TRGV1A0A0A0MS02 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TRGV1A0A0A0MS02 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.02□□□□□ -0.64
TRGV1A0A0A0MS02 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
TRGV1A0A0A0MS02 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
TRGV1A0A0A0MS02 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 SUN1-204ENST00000403868 978 ntTSL 2 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 MRPS18AP1-201ENST00000414458 589 ntBASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 RN7SL399P-201ENST00000471648 279 ntBASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 AC093004.1-201ENST00000508850 424 ntBASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 AC055876.2-201ENST00000531834 546 ntBASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 AC023310.3-201ENST00000557027 670 ntBASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 AC100756.1-201ENST00000562736 682 ntBASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 AC138749.3-201ENST00000567691 622 ntBASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 AC004233.3-201ENST00000607794 1269 ntBASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 AC116165.1-201ENST00000611806 668 ntBASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 FGD5P1-202ENST00000614866 2498 ntBASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 CICP24-201ENST00000605464 2705 ntBASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.02□□□□□ -0.65
TRGV1A0A0A0MS02 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 ACE3P-201ENST00000423435 1973 ntBASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms