Protein–RNA interactions for Protein: Q9Y2N7

HIF3A, Hypoxia-inducible factor 3-alpha, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3AQ9Y2N7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 SPDYE19P-201ENST00000338590 713 ntBASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 AC093214.1-201ENST00000511688 1107 ntBASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 AC005498.2-205ENST00000593218 784 ntBASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 AC099568.2-201ENST00000609194 695 ntBASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 AC006538.3-201ENST00000612495 578 ntBASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 PRSS30P-206ENST00000641773 873 ntBASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
HIF3AQ9Y2N7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 AC093004.1-201ENST00000508850 424 ntBASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 RFPL4AP1-201ENST00000530883 850 ntBASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 AC018665.1-201ENST00000622927 1362 ntBASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 INTS4P2-202ENST00000614726 2019 ntBASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 AC023090.2-201ENST00000625182 2110 ntBASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.66□□□□□ -0.22
HIF3AQ9Y2N7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms