Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC20.42■□□□□ 0.86
NINLQ9Y2I6 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC20.42■□□□□ 0.86
NINLQ9Y2I6 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC20.42■□□□□ 0.86
NINLQ9Y2I6 EID1-202ENST00000560490 584 ntTSL 3 BASIC20.42■□□□□ 0.86
NINLQ9Y2I6 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC20.42■□□□□ 0.86
NINLQ9Y2I6 AC090164.2-201ENST00000611487 516 ntBASIC20.42■□□□□ 0.86
NINLQ9Y2I6 AP003419.4-201ENST00000616071 517 ntBASIC20.42■□□□□ 0.86
NINLQ9Y2I6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NINLQ9Y2I6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NINLQ9Y2I6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NINLQ9Y2I6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NINLQ9Y2I6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NINLQ9Y2I6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 CASP16P-204ENST00000635032 809 ntBASIC20.41■□□□□ 0.86
NINLQ9Y2I6 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 AC006486.2-201ENST00000624246 2199 ntBASIC20.41■□□□□ 0.86
NINLQ9Y2I6 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC20.41■□□□□ 0.86
NINLQ9Y2I6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 CRCP-204ENST00000398684 492 ntTSL 2 BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 KLF2P1-201ENST00000447438 1042 ntBASIC20.4■□□□□ 0.86
NINLQ9Y2I6 FTLP1-201ENST00000449155 526 ntBASIC20.4■□□□□ 0.86
NINLQ9Y2I6 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 IMP3P2-201ENST00000489760 475 ntBASIC20.4■□□□□ 0.86
NINLQ9Y2I6 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 AC009779.1-201ENST00000551138 283 ntBASIC20.4■□□□□ 0.86
NINLQ9Y2I6 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 AC091812.3-201ENST00000621362 345 ntBASIC20.4■□□□□ 0.86
NINLQ9Y2I6 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 TUBBP5-203ENST00000508529 1334 ntBASIC20.4■□□□□ 0.86
NINLQ9Y2I6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 FAM90A7P-201ENST00000382628 1395 ntBASIC20.4■□□□□ 0.86
NINLQ9Y2I6 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 FAM90A23P-201ENST00000400136 1395 ntBASIC20.4■□□□□ 0.86
NINLQ9Y2I6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC20.4■□□□□ 0.86
NINLQ9Y2I6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
NINLQ9Y2I6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NINLQ9Y2I6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
NINLQ9Y2I6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC20.39■□□□□ 0.86
NINLQ9Y2I6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC20.39■□□□□ 0.86
NINLQ9Y2I6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NINLQ9Y2I6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NINLQ9Y2I6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NINLQ9Y2I6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NINLQ9Y2I6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC20.39■□□□□ 0.86
NINLQ9Y2I6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.39■□□□□ 0.86
NINLQ9Y2I6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.86
NINLQ9Y2I6 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 AC125604.1-201ENST00000496255 707 ntBASIC20.39■□□□□ 0.85
NINLQ9Y2I6 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms