Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 PAUPAR-201ENST00000630360 2965 ntBASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 CMC2-224ENST00000630396 481 ntTSL 5 BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 AC015909.3-201ENST00000572855 1794 ntBASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 AL365203.3-201ENST00000609742 2057 ntBASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 AC005052.1-201ENST00000625181 2492 ntBASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 AL157407.1-201ENST00000435784 904 ntBASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 RPS23-204ENST00000507980 836 ntTSL 2 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 AC133540.1-201ENST00000620845 1019 ntBASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 INE2-201ENST00000630399 1874 ntBASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 ZNF436-AS1-201ENST00000335648 2547 ntBASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.03■□□□□ 0.48
ZC3H4Q9UPT8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 HLA-DMA-203ENST00000395305 777 ntBASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 ACTBP7-201ENST00000418351 1124 ntBASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 AC023824.1-201ENST00000562945 2975 ntBASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms