Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 CD8B2-202ENST00000417670 633 ntBASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HDAC6Q9UBN7 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
HDAC6Q9UBN7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.08■□□□□ 0.33
HDAC6Q9UBN7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HDAC6Q9UBN7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
HDAC6Q9UBN7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.08■□□□□ 0.33
HDAC6Q9UBN7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HDAC6Q9UBN7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.08■□□□□ 0.33
HDAC6Q9UBN7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HDAC6Q9UBN7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.08■□□□□ 0.33
HDAC6Q9UBN7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 NUS1P3-201ENST00000423502 862 ntBASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 AP001258.2-201ENST00000529891 490 ntBASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 AC005695.3-201ENST00000614522 232 ntBASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 AL008638.5-201ENST00000623814 1298 ntBASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 PRSS30P-206ENST00000641773 873 ntBASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HDAC6Q9UBN7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 LINC00552-201ENST00000625151 2579 ntBASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 TPM3P8-201ENST00000330554 643 ntBASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms