Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CALCOCO1Q9P1Z2 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC16.65■□□□□ 0.26
CALCOCO1Q9P1Z2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CALCOCO1Q9P1Z2 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CALCOCO1Q9P1Z2 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CALCOCO1Q9P1Z2 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CALCOCO1Q9P1Z2 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CALCOCO1Q9P1Z2 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CALCOCO1Q9P1Z2 AL359881.3-201ENST00000602640 1721 ntBASIC16.65■□□□□ 0.26
CALCOCO1Q9P1Z2 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.65■□□□□ 0.26
CALCOCO1Q9P1Z2 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.65■□□□□ 0.26
CALCOCO1Q9P1Z2 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CALCOCO1Q9P1Z2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CALCOCO1Q9P1Z2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 PIN1P1-201ENST00000412108 996 ntBASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 AC027307.3-201ENST00000594262 1100 ntBASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 AC140479.7-201ENST00000636301 2332 ntBASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CALCOCO1Q9P1Z2 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 PPT1-213ENST00000641319 2388 ntBASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 GK-202ENST00000378941 458 ntTSL 3 BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 AL844908.2-201ENST00000609461 460 ntBASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC16.63■□□□□ 0.25
CALCOCO1Q9P1Z2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 HSPA7-201ENST00000445535 1927 ntBASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms