Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 EEF1DP1-201ENST00000585891 896 ntBASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 INE2-201ENST00000630399 1874 ntBASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMG20BQ9P0W2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 AJ011931.1-201ENST00000618749 2492 ntBASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 PPY2P-201ENST00000582808 702 ntBASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 AC091271.1-201ENST00000611877 1162 ntBASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20BQ9P0W2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 AC068587.6-202ENST00000641839 5619 ntBASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMG20BQ9P0W2 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 AC023824.1-201ENST00000562945 2975 ntBASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.3■□□□□ 0.52
HMG20BQ9P0W2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms