Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AL390755.1-201ENST00000623716 2027 ntBASIC19.38■□□□□ 0.69
SMC4Q9NTJ3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.38■□□□□ 0.69
SMC4Q9NTJ3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC19.38■□□□□ 0.69
SMC4Q9NTJ3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMC4Q9NTJ3 AL161772.1-201ENST00000610494 4412 ntBASIC19.38■□□□□ 0.69
SMC4Q9NTJ3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC19.38■□□□□ 0.69
SMC4Q9NTJ3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMC4Q9NTJ3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMC4Q9NTJ3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMC4Q9NTJ3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMC4Q9NTJ3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 LINC00552-201ENST00000625151 2579 ntBASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 AC005225.4-201ENST00000557330 545 ntBASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 AC015936.2-201ENST00000593177 259 ntBASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 AC012645.4-201ENST00000610691 1061 ntBASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 AL603764.1-201ENST00000636452 321 ntBASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC19.37■□□□□ 0.69
SMC4Q9NTJ3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 SLC25A47P1-201ENST00000531577 414 ntBASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 AL138709.1-201ENST00000614840 1693 ntBASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SMC4Q9NTJ3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 AC018665.1-201ENST00000622927 1362 ntBASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 API5-203ENST00000455725 2257 ntTSL 2 BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 AL355864.2-201ENST00000447420 863 ntBASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 BCRP2-202ENST00000447763 634 ntBASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 BCRP6-201ENST00000510112 632 ntBASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 BCRP7-201ENST00000511549 544 ntBASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms