Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 AC005077.2-201ENST00000449786 690 ntBASIC15.65■□□□□ 0.1
HPS4Q9NQG7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 AC244157.2-201ENST00000616239 1006 ntBASIC15.65■□□□□ 0.1
HPS4Q9NQG7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 AC009090.5-201ENST00000624886 2285 ntBASIC15.65■□□□□ 0.1
HPS4Q9NQG7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 PRAL-201ENST00000624952 3286 ntBASIC15.65■□□□□ 0.1
HPS4Q9NQG7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.65■□□□□ 0.1
HPS4Q9NQG7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.64■□□□□ 0.1
HPS4Q9NQG7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.64■□□□□ 0.1
HPS4Q9NQG7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.64■□□□□ 0.09
HPS4Q9NQG7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.63■□□□□ 0.09
HPS4Q9NQG7 HLA-K-203ENST00000430151 1046 ntBASIC15.63■□□□□ 0.09
HPS4Q9NQG7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 RNA5SP423-201ENST00000517127 109 ntBASIC15.63■□□□□ 0.09
HPS4Q9NQG7 AC126915.1-201ENST00000522847 1038 ntBASIC15.63■□□□□ 0.09
HPS4Q9NQG7 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms