Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SND1-IT1Q9HBX3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 AC015802.1-201ENST00000588104 1449 ntBASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 HLA-H-201ENST00000383620 1096 ntBASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 AC136604.1-201ENST00000418535 575 ntBASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 AC142381.1-201ENST00000426099 345 ntBASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 KRT18P56-201ENST00000507275 550 ntBASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 CD63-204ENST00000546939 779 ntTSL 3 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 PDPK2P-202ENST00000562415 1191 ntBASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 AP001005.1-201ENST00000571755 1248 ntBASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 AC018442.1-201ENST00000421439 2061 ntBASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC10.19□□□□□ -0.78
SND1-IT1Q9HBX3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 TCAF1P1-201ENST00000414990 2232 ntBASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 AC089987.1-201ENST00000551654 2209 ntBASIC10.18□□□□□ -0.78
SND1-IT1Q9HBX3 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms