Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 REXO1L4P-201ENST00000605109 1937 ntBASIC13.27□□□□□ -0.29
CDH20Q9HBT6 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 AC006486.2-201ENST00000624246 2199 ntBASIC13.27□□□□□ -0.29
CDH20Q9HBT6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.27□□□□□ -0.29
CDH20Q9HBT6 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 COX5BP8-201ENST00000416911 349 ntBASIC13.26□□□□□ -0.29
CDH20Q9HBT6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 MROH4P-201ENST00000431302 1578 ntBASIC13.26□□□□□ -0.29
CDH20Q9HBT6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 CICP4-201ENST00000447359 2812 ntBASIC13.26□□□□□ -0.29
CDH20Q9HBT6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 LRRC59-203ENST00000576448 1531 ntBASIC13.26□□□□□ -0.29
CDH20Q9HBT6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 CLUHP6-201ENST00000580789 941 ntBASIC13.26□□□□□ -0.29
CDH20Q9HBT6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 AC015936.2-201ENST00000593177 259 ntBASIC13.26□□□□□ -0.29
CDH20Q9HBT6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CDH20Q9HBT6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms