Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ELL3Q9HB65 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
ELL3Q9HB65 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 AC067863.1-201ENST00000494933 530 ntBASIC13.29□□□□□ -0.28
ELL3Q9HB65 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 AC140878.1-201ENST00000565277 250 ntBASIC13.29□□□□□ -0.28
ELL3Q9HB65 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 AL138828.2-201ENST00000615812 383 ntBASIC13.29□□□□□ -0.28
ELL3Q9HB65 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 AC073592.8-201ENST00000624126 511 ntBASIC13.29□□□□□ -0.28
ELL3Q9HB65 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 KRT8P12-202ENST00000472924 1397 ntBASIC13.29□□□□□ -0.28
ELL3Q9HB65 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
ELL3Q9HB65 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ELL3Q9HB65 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 SPDYE17-201ENST00000412399 783 ntBASIC13.28□□□□□ -0.28
ELL3Q9HB65 RPL37AP1-201ENST00000412502 279 ntBASIC13.28□□□□□ -0.28
ELL3Q9HB65 AL080243.2-201ENST00000418783 582 ntBASIC13.28□□□□□ -0.28
ELL3Q9HB65 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 SERBP1P3-201ENST00000459980 809 ntBASIC13.28□□□□□ -0.28
ELL3Q9HB65 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 RFPL4AP1-201ENST00000530883 850 ntBASIC13.28□□□□□ -0.28
ELL3Q9HB65 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 AL390754.1-201ENST00000619088 582 ntBASIC13.28□□□□□ -0.28
ELL3Q9HB65 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms