Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 RNU1-129P-201ENST00000384064 167 ntBASIC12.29□□□□□ -0.44
NKX6-2Q9C056 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 AP002383.4-201ENST00000442518 975 ntBASIC12.29□□□□□ -0.44
NKX6-2Q9C056 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 U1.21-201ENST00000580816 167 ntBASIC12.29□□□□□ -0.44
NKX6-2Q9C056 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NKX6-2Q9C056 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 AC018442.1-201ENST00000421439 2061 ntBASIC12.28□□□□□ -0.44
NKX6-2Q9C056 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 TPT1P11-201ENST00000458482 498 ntBASIC12.28□□□□□ -0.44
NKX6-2Q9C056 SCARNA2-201ENST00000458748 420 ntBASIC12.28□□□□□ -0.44
NKX6-2Q9C056 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.28□□□□□ -0.44
NKX6-2Q9C056 DUX4L26-201ENST00000489078 1255 ntBASIC12.28□□□□□ -0.44
NKX6-2Q9C056 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 MTDHP4-201ENST00000600287 670 ntBASIC12.28□□□□□ -0.44
NKX6-2Q9C056 AL031055.1-201ENST00000606362 631 ntBASIC12.28□□□□□ -0.44
NKX6-2Q9C056 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
NKX6-2Q9C056 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NKX6-2Q9C056 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.27□□□□□ -0.44
NKX6-2Q9C056 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX6-2Q9C056 AC102953.2-201ENST00000609755 3026 ntBASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms