Protein–RNA interactions for Protein: Q9BTV4

TMEM43, Transmembrane protein 43, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM43Q9BTV4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM43Q9BTV4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 SPDYE19P-201ENST00000338590 713 ntBASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 NUS1P3-201ENST00000423502 862 ntBASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 BRI3BPP1-201ENST00000594224 787 ntBASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 BX640514.1-201ENST00000583223 1918 ntBASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM43Q9BTV4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.83□□□□□ -0.19
TMEM43Q9BTV4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM43Q9BTV4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM43Q9BTV4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
TMEM43Q9BTV4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.83□□□□□ -0.19
TMEM43Q9BTV4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM43Q9BTV4 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM43Q9BTV4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM43Q9BTV4 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM43Q9BTV4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 AC027601.5-201ENST00000624065 2482 ntBASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 VDAC1P7-201ENST00000462417 847 ntBASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 AC055876.2-201ENST00000531834 546 ntBASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 HSPA7-201ENST00000445535 1927 ntBASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM43Q9BTV4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms