Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA3Q99758 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA3Q99758 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA3Q99758 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA3Q99758 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC19.35■□□□□ 0.69
ABCA3Q99758 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA3Q99758 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA3Q99758 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA3Q99758 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCA3Q99758 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC19.34■□□□□ 0.69
ABCA3Q99758 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC19.34■□□□□ 0.69
ABCA3Q99758 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCA3Q99758 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCA3Q99758 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC19.34■□□□□ 0.69
ABCA3Q99758 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC19.34■□□□□ 0.69
ABCA3Q99758 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ABCA3Q99758 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC19.34■□□□□ 0.69
ABCA3Q99758 VENTXP3-201ENST00000546480 773 ntBASIC19.34■□□□□ 0.69
ABCA3Q99758 MBP-238ENST00000580402 915 ntTSL 5 BASIC19.34■□□□□ 0.69
ABCA3Q99758 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ABCA3Q99758 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ABCA3Q99758 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ABCA3Q99758 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
ABCA3Q99758 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCA3Q99758 PCDHGB8P-201ENST00000502926 1973 ntBASIC19.34■□□□□ 0.69
ABCA3Q99758 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC19.34■□□□□ 0.69
ABCA3Q99758 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCA3Q99758 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCA3Q99758 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ABCA3Q99758 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCA3Q99758 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC19.34■□□□□ 0.69
ABCA3Q99758 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC19.34■□□□□ 0.69
ABCA3Q99758 HLA-DPA2-205ENST00000433582 733 ntBASIC19.34■□□□□ 0.69
ABCA3Q99758 AL451000.1-201ENST00000451300 1186 ntBASIC19.34■□□□□ 0.69
ABCA3Q99758 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC19.34■□□□□ 0.69
ABCA3Q99758 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCA3Q99758 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC19.33■□□□□ 0.69
ABCA3Q99758 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ABCA3Q99758 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.33■□□□□ 0.69
ABCA3Q99758 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
ABCA3Q99758 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ABCA3Q99758 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC19.33■□□□□ 0.69
ABCA3Q99758 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ABCA3Q99758 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.33■□□□□ 0.69
ABCA3Q99758 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ABCA3Q99758 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ABCA3Q99758 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ABCA3Q99758 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ABCA3Q99758 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ABCA3Q99758 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ABCA3Q99758 PHB-210ENST00000511832 1509 ntTSL 2 BASIC19.33■□□□□ 0.68
ABCA3Q99758 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ABCA3Q99758 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ABCA3Q99758 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ABCA3Q99758 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ABCA3Q99758 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC19.33■□□□□ 0.68
ABCA3Q99758 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC19.33■□□□□ 0.68
ABCA3Q99758 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ABCA3Q99758 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC19.33■□□□□ 0.68
ABCA3Q99758 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ABCA3Q99758 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC19.33■□□□□ 0.68
ABCA3Q99758 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC19.33■□□□□ 0.68
ABCA3Q99758 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC19.33■□□□□ 0.68
ABCA3Q99758 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC19.33■□□□□ 0.68
ABCA3Q99758 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
ABCA3Q99758 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ABCA3Q99758 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC19.32■□□□□ 0.68
ABCA3Q99758 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCA3Q99758 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCA3Q99758 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC19.32■□□□□ 0.68
ABCA3Q99758 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCA3Q99758 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.32■□□□□ 0.68
ABCA3Q99758 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC19.32■□□□□ 0.68
ABCA3Q99758 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC19.32■□□□□ 0.68
ABCA3Q99758 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC19.32■□□□□ 0.68
ABCA3Q99758 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ABCA3Q99758 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCA3Q99758 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ABCA3Q99758 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC19.32■□□□□ 0.68
ABCA3Q99758 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC19.32■□□□□ 0.68
ABCA3Q99758 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC19.32■□□□□ 0.68
ABCA3Q99758 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC19.32■□□□□ 0.68
ABCA3Q99758 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCA3Q99758 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCA3Q99758 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ABCA3Q99758 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCA3Q99758 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
ABCA3Q99758 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC19.32■□□□□ 0.68
ABCA3Q99758 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCA3Q99758 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC19.32■□□□□ 0.68
ABCA3Q99758 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCA3Q99758 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.32■□□□□ 0.68
ABCA3Q99758 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC19.32■□□□□ 0.68
ABCA3Q99758 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCA3Q99758 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCA3Q99758 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ABCA3Q99758 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCA3Q99758 LINC00265-2P-201ENST00000413372 782 ntBASIC19.31■□□□□ 0.68
ABCA3Q99758 RN7SL147P-201ENST00000487345 298 ntBASIC19.31■□□□□ 0.68
ABCA3Q99758 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms