Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.87□□□□□ -0.03
NPAS2Q99743 AP005018.1-201ENST00000525475 301 ntBASIC14.87□□□□□ -0.03
NPAS2Q99743 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.87□□□□□ -0.03
NPAS2Q99743 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.87□□□□□ -0.03
NPAS2Q99743 AC135586.1-201ENST00000539323 574 ntBASIC14.87□□□□□ -0.03
NPAS2Q99743 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.87□□□□□ -0.03
NPAS2Q99743 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.87□□□□□ -0.03
NPAS2Q99743 SPDYE22P-201ENST00000582158 798 ntBASIC14.87□□□□□ -0.03
NPAS2Q99743 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.87□□□□□ -0.03
NPAS2Q99743 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.87□□□□□ -0.03
NPAS2Q99743 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.87□□□□□ -0.03
NPAS2Q99743 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.87□□□□□ -0.03
NPAS2Q99743 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.87□□□□□ -0.03
NPAS2Q99743 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.87□□□□□ -0.03
NPAS2Q99743 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
NPAS2Q99743 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.87□□□□□ -0.03
NPAS2Q99743 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.87□□□□□ -0.03
NPAS2Q99743 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
NPAS2Q99743 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NPAS2Q99743 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.87□□□□□ -0.03
NPAS2Q99743 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.87□□□□□ -0.03
NPAS2Q99743 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NPAS2Q99743 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS2Q99743 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS2Q99743 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NPAS2Q99743 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS2Q99743 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS2Q99743 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS2Q99743 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS2Q99743 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS2Q99743 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NPAS2Q99743 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS2Q99743 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
NPAS2Q99743 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS2Q99743 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS2Q99743 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS2Q99743 GHSR-202ENST00000427970 912 ntBASIC14.86□□□□□ -0.03
NPAS2Q99743 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.86□□□□□ -0.03
NPAS2Q99743 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.86□□□□□ -0.03
NPAS2Q99743 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NPAS2Q99743 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS2Q99743 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.86□□□□□ -0.03
NPAS2Q99743 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.86□□□□□ -0.03
NPAS2Q99743 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.86□□□□□ -0.03
NPAS2Q99743 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS2Q99743 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NPAS2Q99743 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS2Q99743 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.86□□□□□ -0.03
NPAS2Q99743 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS2Q99743 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS2Q99743 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS2Q99743 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NPAS2Q99743 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NPAS2Q99743 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.86□□□□□ -0.03
NPAS2Q99743 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NPAS2Q99743 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.86□□□□□ -0.03
NPAS2Q99743 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS2Q99743 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS2Q99743 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NPAS2Q99743 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS2Q99743 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS2Q99743 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS2Q99743 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NPAS2Q99743 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS2Q99743 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPAS2Q99743 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NPAS2Q99743 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NPAS2Q99743 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.85□□□□□ -0.03
NPAS2Q99743 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.85□□□□□ -0.03
NPAS2Q99743 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.85□□□□□ -0.03
NPAS2Q99743 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.85□□□□□ -0.03
NPAS2Q99743 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
NPAS2Q99743 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPAS2Q99743 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.85□□□□□ -0.03
NPAS2Q99743 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms