Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.09□□□□□ -0.63
MUC4Q99102 TREML5P-201ENST00000421694 576 ntBASIC11.09□□□□□ -0.63
MUC4Q99102 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
MUC4Q99102 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC11.09□□□□□ -0.63
MUC4Q99102 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.09□□□□□ -0.63
MUC4Q99102 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC11.09□□□□□ -0.63
MUC4Q99102 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC11.09□□□□□ -0.63
MUC4Q99102 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
MUC4Q99102 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
MUC4Q99102 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC11.08□□□□□ -0.64
MUC4Q99102 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
MUC4Q99102 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 AL928921.2-201ENST00000641325 2442 ntBASIC11.08□□□□□ -0.64
MUC4Q99102 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.08□□□□□ -0.64
MUC4Q99102 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC11.08□□□□□ -0.64
MUC4Q99102 TPRX2P-201ENST00000535362 881 ntBASIC11.08□□□□□ -0.64
MUC4Q99102 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.08□□□□□ -0.64
MUC4Q99102 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
MUC4Q99102 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.08□□□□□ -0.64
MUC4Q99102 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.08□□□□□ -0.64
MUC4Q99102 MIR4538-201ENST00000581377 78 ntBASIC11.08□□□□□ -0.64
MUC4Q99102 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.08□□□□□ -0.64
MUC4Q99102 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 AC087499.5-201ENST00000452760 1342 ntBASIC11.08□□□□□ -0.64
MUC4Q99102 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 SLC7A15P-201ENST00000424028 1363 ntBASIC11.08□□□□□ -0.64
MUC4Q99102 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.08□□□□□ -0.64
MUC4Q99102 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
MUC4Q99102 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
MUC4Q99102 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC11.08□□□□□ -0.64
MUC4Q99102 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.08□□□□□ -0.64
MUC4Q99102 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
MUC4Q99102 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
MUC4Q99102 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 AC138969.3-201ENST00000546612 1459 ntBASIC11.08□□□□□ -0.64
MUC4Q99102 AC138932.2-201ENST00000548268 1459 ntBASIC11.08□□□□□ -0.64
MUC4Q99102 AC126755.4-201ENST00000549796 1459 ntBASIC11.08□□□□□ -0.64
MUC4Q99102 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
MUC4Q99102 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
MUC4Q99102 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
MUC4Q99102 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
MUC4Q99102 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
MUC4Q99102 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.08□□□□□ -0.64
MUC4Q99102 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MUC4Q99102 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
MUC4Q99102 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 FAM86MP-201ENST00000340703 885 ntBASIC11.07□□□□□ -0.64
MUC4Q99102 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
MUC4Q99102 RPL13P2-201ENST00000440687 659 ntBASIC11.07□□□□□ -0.64
MUC4Q99102 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC11.07□□□□□ -0.64
MUC4Q99102 GIMAP3P-201ENST00000495150 836 ntBASIC11.07□□□□□ -0.64
MUC4Q99102 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.07□□□□□ -0.64
MUC4Q99102 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
MUC4Q99102 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.07□□□□□ -0.64
MUC4Q99102 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.07□□□□□ -0.64
MUC4Q99102 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC11.07□□□□□ -0.64
MUC4Q99102 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC11.07□□□□□ -0.64
MUC4Q99102 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC11.07□□□□□ -0.64
MUC4Q99102 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
MUC4Q99102 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.07□□□□□ -0.64
MUC4Q99102 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
MUC4Q99102 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.07□□□□□ -0.64
MUC4Q99102 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms