Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 CSF2RBP1-201ENST00000447905 391 ntBASIC13.74□□□□□ -0.21
LRRC46Q96FV0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 AP000812.2-201ENST00000538934 718 ntBASIC13.74□□□□□ -0.21
LRRC46Q96FV0 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 AC007191.1-201ENST00000623179 2995 ntBASIC13.74□□□□□ -0.21
LRRC46Q96FV0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC46Q96FV0 LINC00528-201ENST00000600723 2160 ntBASIC13.73□□□□□ -0.21
LRRC46Q96FV0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 AL603832.2-201ENST00000566195 2125 ntBASIC13.73□□□□□ -0.21
LRRC46Q96FV0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 HNRNPUP1-201ENST00000554987 333 ntBASIC13.73□□□□□ -0.21
LRRC46Q96FV0 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 AC107918.4-201ENST00000641966 3141 ntBASIC13.73□□□□□ -0.21
LRRC46Q96FV0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC46Q96FV0 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms