Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APH1AQ96BI3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
APH1AQ96BI3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APH1AQ96BI3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
APH1AQ96BI3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APH1AQ96BI3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APH1AQ96BI3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
APH1AQ96BI3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
APH1AQ96BI3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
APH1AQ96BI3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
APH1AQ96BI3 CTBP2P5-201ENST00000454986 1264 ntBASIC13.41□□□□□ -0.26
APH1AQ96BI3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 KRT90P-201ENST00000549264 1064 ntBASIC13.41□□□□□ -0.26
APH1AQ96BI3 AC104640.1-201ENST00000562617 2109 ntBASIC13.41□□□□□ -0.26
APH1AQ96BI3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 AC244669.2-201ENST00000612320 853 ntBASIC13.41□□□□□ -0.26
APH1AQ96BI3 ENPP7P14-201ENST00000621765 1040 ntBASIC13.41□□□□□ -0.26
APH1AQ96BI3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APH1AQ96BI3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
APH1AQ96BI3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
APH1AQ96BI3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APH1AQ96BI3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APH1AQ96BI3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APH1AQ96BI3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APH1AQ96BI3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.41□□□□□ -0.26
APH1AQ96BI3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.41□□□□□ -0.26
APH1AQ96BI3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APH1AQ96BI3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
APH1AQ96BI3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APH1AQ96BI3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APH1AQ96BI3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 REXO1L2P-201ENST00000425429 2069 ntBASIC13.4□□□□□ -0.26
APH1AQ96BI3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APH1AQ96BI3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APH1AQ96BI3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 MIR1909-201ENST00000411312 80 ntBASIC13.4□□□□□ -0.26
APH1AQ96BI3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 AC245100.3-201ENST00000441281 285 ntBASIC13.4□□□□□ -0.26
APH1AQ96BI3 RPL7P3-201ENST00000441388 714 ntBASIC13.4□□□□□ -0.26
APH1AQ96BI3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 RNA5SP486-201ENST00000515961 83 ntBASIC13.4□□□□□ -0.26
APH1AQ96BI3 AP005482.1-201ENST00000563722 1273 ntBASIC13.4□□□□□ -0.26
APH1AQ96BI3 DUX4L47-201ENST00000566374 394 ntBASIC13.4□□□□□ -0.26
APH1AQ96BI3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 AC133552.6-201ENST00000613406 534 ntBASIC13.4□□□□□ -0.26
APH1AQ96BI3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 AC138951.2-201ENST00000623455 1161 ntBASIC13.4□□□□□ -0.26
APH1AQ96BI3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APH1AQ96BI3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APH1AQ96BI3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
APH1AQ96BI3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 AC091951.1-201ENST00000512854 2465 ntBASIC13.4□□□□□ -0.26
APH1AQ96BI3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
APH1AQ96BI3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APH1AQ96BI3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
APH1AQ96BI3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
APH1AQ96BI3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
APH1AQ96BI3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APH1AQ96BI3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
APH1AQ96BI3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.27
APH1AQ96BI3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
APH1AQ96BI3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.39□□□□□ -0.27
APH1AQ96BI3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APH1AQ96BI3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms