Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 LINC00431-202ENST00000636375 159 ntBASIC14.83□□□□□ -0.04
CLDN23Q96B33 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CLDN23Q96B33 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.83□□□□□ -0.04
CLDN23Q96B33 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN23Q96B33 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN23Q96B33 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN23Q96B33 MARK2P16-201ENST00000605714 1723 ntBASIC14.83□□□□□ -0.04
CLDN23Q96B33 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN23Q96B33 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN23Q96B33 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN23Q96B33 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN23Q96B33 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLDN23Q96B33 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN23Q96B33 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN23Q96B33 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN23Q96B33 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 IL9RP3-201ENST00000442856 1674 ntBASIC14.82□□□□□ -0.04
CLDN23Q96B33 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CLDN23Q96B33 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.82□□□□□ -0.04
CLDN23Q96B33 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CLDN23Q96B33 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.82□□□□□ -0.04
CLDN23Q96B33 AC004837.1-201ENST00000446267 564 ntBASIC14.82□□□□□ -0.04
CLDN23Q96B33 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.82□□□□□ -0.04
CLDN23Q96B33 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.82□□□□□ -0.04
CLDN23Q96B33 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN23Q96B33 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLDN23Q96B33 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN23Q96B33 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC14.82□□□□□ -0.04
CLDN23Q96B33 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN23Q96B33 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN23Q96B33 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 AP003680.1-201ENST00000598970 3660 ntBASIC14.82□□□□□ -0.04
CLDN23Q96B33 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 CICP13-201ENST00000422015 2789 ntBASIC14.82□□□□□ -0.04
CLDN23Q96B33 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLDN23Q96B33 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CLDN23Q96B33 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN23Q96B33 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN23Q96B33 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN23Q96B33 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN23Q96B33 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN23Q96B33 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN23Q96B33 PCDHA14-201ENST00000506751 2298 ntBASIC14.81□□□□□ -0.04
CLDN23Q96B33 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN23Q96B33 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN23Q96B33 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN23Q96B33 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.81□□□□□ -0.04
CLDN23Q96B33 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 DUX4L50-201ENST00000455245 715 ntBASIC14.81□□□□□ -0.04
CLDN23Q96B33 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 CR383656.3-201ENST00000551315 183 ntBASIC14.81□□□□□ -0.04
CLDN23Q96B33 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 AC005041.3-201ENST00000606287 649 ntBASIC14.81□□□□□ -0.04
CLDN23Q96B33 RNF146-211ENST00000609447 607 ntTSL 4 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN23Q96B33 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN23Q96B33 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 AC023090.2-201ENST00000625182 2110 ntBASIC14.81□□□□□ -0.04
CLDN23Q96B33 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN23Q96B33 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN23Q96B33 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN23Q96B33 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.81□□□□□ -0.04
CLDN23Q96B33 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms