Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC18.43■□□□□ 0.54
RPGRQ92834 RN7SL736P-201ENST00000613111 269 ntBASIC18.43■□□□□ 0.54
RPGRQ92834 AC027601.3-201ENST00000622907 509 ntBASIC18.43■□□□□ 0.54
RPGRQ92834 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPGRQ92834 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RPGRQ92834 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.43■□□□□ 0.54
RPGRQ92834 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPGRQ92834 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RPGRQ92834 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RPGRQ92834 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPGRQ92834 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RPGRQ92834 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
RPGRQ92834 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RPGRQ92834 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RPGRQ92834 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPGRQ92834 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPGRQ92834 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPGRQ92834 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPGRQ92834 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RPGRQ92834 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.42■□□□□ 0.54
RPGRQ92834 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPGRQ92834 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.42■□□□□ 0.54
RPGRQ92834 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPGRQ92834 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
RPGRQ92834 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPGRQ92834 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC18.42■□□□□ 0.54
RPGRQ92834 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC18.42■□□□□ 0.54
RPGRQ92834 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC18.42■□□□□ 0.54
RPGRQ92834 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.42■□□□□ 0.54
RPGRQ92834 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC18.42■□□□□ 0.54
RPGRQ92834 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC18.42■□□□□ 0.54
RPGRQ92834 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPGRQ92834 AC051619.9-201ENST00000623237 597 ntBASIC18.42■□□□□ 0.54
RPGRQ92834 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.42■□□□□ 0.54
RPGRQ92834 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPGRQ92834 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.42■□□□□ 0.54
RPGRQ92834 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPGRQ92834 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPGRQ92834 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPGRQ92834 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPGRQ92834 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPGRQ92834 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
RPGRQ92834 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPGRQ92834 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.41■□□□□ 0.54
RPGRQ92834 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RPGRQ92834 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.41■□□□□ 0.54
RPGRQ92834 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPGRQ92834 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.41■□□□□ 0.54
RPGRQ92834 AL513523.2-202ENST00000427283 2040 ntBASIC18.41■□□□□ 0.54
RPGRQ92834 SALL4P5-201ENST00000419001 1760 ntBASIC18.41■□□□□ 0.54
RPGRQ92834 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPGRQ92834 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPGRQ92834 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPGRQ92834 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPGRQ92834 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC18.41■□□□□ 0.54
RPGRQ92834 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPGRQ92834 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RPGRQ92834 ALG3P1-201ENST00000508806 1114 ntBASIC18.41■□□□□ 0.54
RPGRQ92834 NPM1P43-201ENST00000558669 786 ntBASIC18.41■□□□□ 0.54
RPGRQ92834 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC18.41■□□□□ 0.54
RPGRQ92834 AL157813.1-201ENST00000612996 587 ntBASIC18.41■□□□□ 0.54
RPGRQ92834 AC007718.1-201ENST00000621078 280 ntBASIC18.41■□□□□ 0.54
RPGRQ92834 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
RPGRQ92834 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
RPGRQ92834 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.41■□□□□ 0.54
RPGRQ92834 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RPGRQ92834 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RPGRQ92834 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPGRQ92834 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RPGRQ92834 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPGRQ92834 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.41■□□□□ 0.54
RPGRQ92834 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPGRQ92834 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RPGRQ92834 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPGRQ92834 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPGRQ92834 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RPGRQ92834 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RPGRQ92834 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.4■□□□□ 0.54
RPGRQ92834 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.4■□□□□ 0.54
RPGRQ92834 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 OR2K2-202ENST00000374428 1038 ntBASIC18.4■□□□□ 0.54
RPGRQ92834 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.4■□□□□ 0.54
RPGRQ92834 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RPGRQ92834 RN7SL258P-201ENST00000478664 300 ntBASIC18.4■□□□□ 0.54
RPGRQ92834 RN7SL67P-201ENST00000492147 296 ntBASIC18.4■□□□□ 0.54
RPGRQ92834 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC18.4■□□□□ 0.54
RPGRQ92834 AC008723.1-201ENST00000506922 207 ntBASIC18.4■□□□□ 0.54
RPGRQ92834 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RPGRQ92834 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms