Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.05■□□□□ 0.16
SHC3Q92529 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHC3Q92529 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHC3Q92529 AL136379.1-201ENST00000623471 2642 ntBASIC16.05■□□□□ 0.16
SHC3Q92529 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHC3Q92529 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHC3Q92529 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SHC3Q92529 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHC3Q92529 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.05■□□□□ 0.16
SHC3Q92529 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHC3Q92529 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHC3Q92529 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHC3Q92529 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SHC3Q92529 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.05■□□□□ 0.16
SHC3Q92529 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHC3Q92529 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.05■□□□□ 0.16
SHC3Q92529 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.05■□□□□ 0.16
SHC3Q92529 AC245100.3-201ENST00000441281 285 ntBASIC16.05■□□□□ 0.16
SHC3Q92529 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SHC3Q92529 RN7SL837P-201ENST00000463010 287 ntBASIC16.05■□□□□ 0.16
SHC3Q92529 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.05■□□□□ 0.16
SHC3Q92529 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.05■□□□□ 0.16
SHC3Q92529 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.05■□□□□ 0.16
SHC3Q92529 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHC3Q92529 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.05■□□□□ 0.16
SHC3Q92529 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHC3Q92529 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHC3Q92529 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHC3Q92529 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
SHC3Q92529 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SHC3Q92529 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHC3Q92529 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHC3Q92529 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SHC3Q92529 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.05■□□□□ 0.16
SHC3Q92529 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.05■□□□□ 0.16
SHC3Q92529 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.05■□□□□ 0.16
SHC3Q92529 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SHC3Q92529 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHC3Q92529 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHC3Q92529 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHC3Q92529 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.04■□□□□ 0.16
SHC3Q92529 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.04■□□□□ 0.16
SHC3Q92529 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.04■□□□□ 0.16
SHC3Q92529 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHC3Q92529 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.04■□□□□ 0.16
SHC3Q92529 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SHC3Q92529 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHC3Q92529 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHC3Q92529 RN7SKP230-201ENST00000365642 335 ntBASIC16.04■□□□□ 0.16
SHC3Q92529 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHC3Q92529 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHC3Q92529 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHC3Q92529 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.04■□□□□ 0.16
SHC3Q92529 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.04■□□□□ 0.16
SHC3Q92529 AC106760.1-201ENST00000508690 800 ntBASIC16.04■□□□□ 0.16
SHC3Q92529 AP001889.1-201ENST00000525414 633 ntBASIC16.04■□□□□ 0.16
SHC3Q92529 AC131206.1-201ENST00000538078 1211 ntBASIC16.04■□□□□ 0.16
SHC3Q92529 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHC3Q92529 RN7SL48P-201ENST00000579283 293 ntBASIC16.04■□□□□ 0.16
SHC3Q92529 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.04■□□□□ 0.16
SHC3Q92529 AC027307.3-201ENST00000594262 1100 ntBASIC16.04■□□□□ 0.16
SHC3Q92529 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHC3Q92529 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHC3Q92529 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.04■□□□□ 0.16
SHC3Q92529 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SHC3Q92529 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHC3Q92529 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SHC3Q92529 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.04■□□□□ 0.16
SHC3Q92529 SNX18-202ENST00000343017 3140 ntBASIC16.03■□□□□ 0.16
SHC3Q92529 AC139749.1-202ENST00000617529 3139 ntBASIC16.03■□□□□ 0.16
SHC3Q92529 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.03■□□□□ 0.16
SHC3Q92529 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SHC3Q92529 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.03■□□□□ 0.16
SHC3Q92529 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.03■□□□□ 0.16
SHC3Q92529 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.03■□□□□ 0.16
SHC3Q92529 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.03■□□□□ 0.16
SHC3Q92529 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SHC3Q92529 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 CLUHP2-201ENST00000426660 1303 ntBASIC16.03■□□□□ 0.16
SHC3Q92529 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.03■□□□□ 0.16
SHC3Q92529 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 AGGF1P1-201ENST00000509500 2073 ntBASIC16.03■□□□□ 0.16
SHC3Q92529 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.03■□□□□ 0.16
SHC3Q92529 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SHC3Q92529 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.03■□□□□ 0.16
SHC3Q92529 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.03■□□□□ 0.16
SHC3Q92529 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SHC3Q92529 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.03■□□□□ 0.16
SHC3Q92529 RN7SL752P-201ENST00000463779 287 ntBASIC16.03■□□□□ 0.16
SHC3Q92529 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.03■□□□□ 0.16
SHC3Q92529 MESTP3-201ENST00000503460 968 ntBASIC16.03■□□□□ 0.16
SHC3Q92529 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SHC3Q92529 AC022447.6-201ENST00000515522 438 ntBASIC16.03■□□□□ 0.16
SHC3Q92529 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms