Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 PGAM5P1-201ENST00000518923 814 ntBASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 SPDYE9P-201ENST00000570642 692 ntBASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 AC026120.1-201ENST00000611536 926 ntBASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 SPDYE10P-202ENST00000612005 668 ntBASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 SPDYE8P-202ENST00000612377 668 ntBASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 FAM197Y3-203ENST00000618346 717 ntBASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 AC007967.2-201ENST00000432613 625 ntBASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 KRT18P3-201ENST00000451602 1288 ntBASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3IL1Q8TBN0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 AC011474.4-201ENST00000623523 2076 ntBASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms