Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 FGD5P1-202ENST00000614866 2498 ntBASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 MESTP3-201ENST00000503460 968 ntBASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 AC073413.1-201ENST00000603927 732 ntBASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 AC138466.3-201ENST00000619983 221 ntBASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 CU633904.3-201ENST00000624042 1029 ntBASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 AC006453.4-201ENST00000636949 1252 ntBASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 AC006058.4-201ENST00000624016 1670 ntBASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX2-3Q8TAU0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 AL133466.1-201ENST00000447582 150 ntBASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 CHMP4BP1-201ENST00000556017 588 ntBASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 MIR4683-201ENST00000579659 81 ntBASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 AC091812.3-201ENST00000621362 345 ntBASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 Z99916.3-201ENST00000623422 1080 ntBASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 AC003102.2-201ENST00000589195 1469 ntBASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.75■□□□□ 0.43
NKX2-3Q8TAU0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms