Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SNX18-202ENST00000343017 3140 ntBASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 BAATP1-201ENST00000412284 1225 ntBASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 AC067930.6-201ENST00000623257 4947 ntBASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 AC134312.5-201ENST00000568031 1313 ntBASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMARCC2Q8TAQ2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 AC018665.1-201ENST00000622927 1362 ntBASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 AL139094.1-201ENST00000405549 1188 ntBASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 NUS1P3-201ENST00000423502 862 ntBASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 IGHV3-71-201ENST00000523324 359 ntBASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 BX539320.1-201ENST00000623759 877 ntBASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 BX640514.1-201ENST00000583223 1918 ntBASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 AC097359.2-201ENST00000604992 2389 ntBASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.66■□□□□ 0.42
SMARCC2Q8TAQ2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms