Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLHC1Q8NHS4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CLHC1Q8NHS4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLHC1Q8NHS4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLHC1Q8NHS4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CLHC1Q8NHS4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLHC1Q8NHS4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLHC1Q8NHS4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 MEIS3P1-201ENST00000495167 958 ntBASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 AC135586.1-201ENST00000539323 574 ntBASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 AC004840.1-201ENST00000636359 365 ntBASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 AL360270.3-201ENST00000609118 1348 ntBASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLHC1Q8NHS4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 AC004066.1-201ENST00000502488 802 ntBASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLHC1Q8NHS4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms