Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 OR10N1P-201ENST00000392758 869 ntBASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 AC010900.1-201ENST00000449849 1296 ntBASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 BCL2L12P1-201ENST00000508390 733 ntBASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL22A1Q8NFW1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL22A1Q8NFW1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL22A1Q8NFW1 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL22A1Q8NFW1 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL22A1Q8NFW1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL22A1Q8NFW1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL22A1Q8NFW1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL22A1Q8NFW1 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 SAT1-201ENST00000379251 801 ntTSL 2 BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 SAT1-202ENST00000379253 909 ntTSL 2 BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 SAT1-203ENST00000379254 868 ntTSL 3 BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 AL157823.1-201ENST00000403727 628 ntBASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 HNRNPA1P2-207ENST00000432375 960 ntBASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 RN7SL788P-201ENST00000460504 316 ntBASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 AC092612.1-201ENST00000514501 998 ntBASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 AC012313.1-201ENST00000593393 3059 ntBASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL22A1Q8NFW1 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 MSANTD2P1-201ENST00000445341 1368 ntBASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 CICP13-201ENST00000422015 2789 ntBASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 NQO2-204ENST00000380454 851 ntTSL 2 BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 AC080013.5-201ENST00000607044 679 ntBASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 MROH4P-201ENST00000431302 1578 ntBASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 AC087481.3-201ENST00000602886 1894 ntBASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.38■□□□□ 0.69
COL22A1Q8NFW1 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL22A1Q8NFW1 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL22A1Q8NFW1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL22A1Q8NFW1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.37■□□□□ 0.69
COL22A1Q8NFW1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COL22A1Q8NFW1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.37■□□□□ 0.69
COL22A1Q8NFW1 RPL3P2-204ENST00000413027 1203 ntBASIC19.37■□□□□ 0.69
COL22A1Q8NFW1 NRADDP-201ENST00000437305 691 ntBASIC19.37■□□□□ 0.69
COL22A1Q8NFW1 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC19.37■□□□□ 0.69
COL22A1Q8NFW1 GRPEL2P1-201ENST00000453145 339 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms