Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 RN7SKP230-201ENST00000365642 335 ntBASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 AP000593.2-201ENST00000542775 1433 ntBASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAM1L1Q8N609 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 SALL4P5-201ENST00000419001 1760 ntBASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 COX5BP1-201ENST00000507622 393 ntBASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 AP003171.2-201ENST00000528208 925 ntBASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 C2orf69P2-201ENST00000562032 1123 ntBASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 RN7SL713P-201ENST00000582127 302 ntBASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAM1L1Q8N609 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 AC011840.2-201ENST00000563063 1520 ntBASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms