Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 HTR5BP-201ENST00000430851 1154 ntBASIC15.07■□□□□ 0
NUDCD3Q8IVD9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 SAMD11P1-201ENST00000571429 661 ntBASIC15.07■□□□□ 0
NUDCD3Q8IVD9 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 AC022145.2-201ENST00000598203 171 ntBASIC15.07■□□□□ 0
NUDCD3Q8IVD9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 LINC00628-201ENST00000628516 1289 ntBASIC15.07■□□□□ 0
NUDCD3Q8IVD9 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 AC105339.1-204ENST00000636249 355 ntBASIC15.07■□□□□ 0
NUDCD3Q8IVD9 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.07■□□□□ 0
NUDCD3Q8IVD9 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 AC025048.3-201ENST00000590609 569 ntBASIC15.06■□□□□ 0
NUDCD3Q8IVD9 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 AC120114.3-201ENST00000611923 658 ntBASIC15.06■□□□□ 0
NUDCD3Q8IVD9 AC005702.4-201ENST00000618393 416 ntBASIC15.06■□□□□ 0
NUDCD3Q8IVD9 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.06■□□□□ 0
NUDCD3Q8IVD9 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms