Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF135Q8IUD6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 AC092384.3-202ENST00000564646 2873 ntBASIC16.06■□□□□ 0.16
RNF135Q8IUD6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 AC073347.1-201ENST00000421633 2643 ntBASIC16.06■□□□□ 0.16
RNF135Q8IUD6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 AC244157.2-201ENST00000616239 1006 ntBASIC16.06■□□□□ 0.16
RNF135Q8IUD6 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 MST1L-201ENST00000442552 2185 ntBASIC16.06■□□□□ 0.16
RNF135Q8IUD6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF135Q8IUD6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 TPM3P8-201ENST00000330554 643 ntBASIC16.05■□□□□ 0.16
RNF135Q8IUD6 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.05■□□□□ 0.16
RNF135Q8IUD6 AC136604.1-201ENST00000418535 575 ntBASIC16.05■□□□□ 0.16
RNF135Q8IUD6 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 AL596276.2-201ENST00000447525 331 ntBASIC16.05■□□□□ 0.16
RNF135Q8IUD6 NUP210P1-202ENST00000504322 710 ntBASIC16.05■□□□□ 0.16
RNF135Q8IUD6 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 AP000346.4-201ENST00000614827 381 ntBASIC16.05■□□□□ 0.16
RNF135Q8IUD6 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF135Q8IUD6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 AC092850.2-201ENST00000623821 2697 ntBASIC16.04■□□□□ 0.16
RNF135Q8IUD6 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF135Q8IUD6 AC008132.1-202ENST00000342005 1389 ntBASIC16.04■□□□□ 0.16
RNF135Q8IUD6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms