Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 AC004066.1-201ENST00000502488 802 ntBASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 AC138466.3-201ENST00000619983 221 ntBASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 CASP16P-204ENST00000635032 809 ntBASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 AP000356.3-201ENST00000382243 753 ntBASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 AC012362.1-201ENST00000434906 739 ntBASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 SAMD11P1-201ENST00000571429 661 ntBASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 AC009955.4-201ENST00000597192 544 ntBASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
OTOP1Q7RTM1 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 CLUHP2-201ENST00000426660 1303 ntBASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 AC022616.1-201ENST00000518688 554 ntBASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 AC022532.1-201ENST00000624563 1728 ntBASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OTOP1Q7RTM1 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.29■□□□□ 0.36
OTOP1Q7RTM1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
OTOP1Q7RTM1 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.29■□□□□ 0.36
OTOP1Q7RTM1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
OTOP1Q7RTM1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
OTOP1Q7RTM1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
OTOP1Q7RTM1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
OTOP1Q7RTM1 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.29■□□□□ 0.36
OTOP1Q7RTM1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
OTOP1Q7RTM1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
OTOP1Q7RTM1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
OTOP1Q7RTM1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.29■□□□□ 0.36
OTOP1Q7RTM1 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.29■□□□□ 0.36
OTOP1Q7RTM1 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms