Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 AC002056.1-201ENST00000395613 760 ntBASIC11.61□□□□□ -0.55
LINC01559Q495D7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 RPS3AP25-201ENST00000411660 793 ntBASIC11.61□□□□□ -0.55
LINC01559Q495D7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 PPP1R2P1-210ENST00000429032 618 ntBASIC11.61□□□□□ -0.55
LINC01559Q495D7 AK3P5-201ENST00000432033 519 ntBASIC11.61□□□□□ -0.55
LINC01559Q495D7 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 AL139010.1-201ENST00000454878 894 ntBASIC11.61□□□□□ -0.55
LINC01559Q495D7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 AC095050.1-201ENST00000502661 905 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 HNRNPUP1-201ENST00000554987 333 ntBASIC11.61□□□□□ -0.55
LINC01559Q495D7 LINC00520-206ENST00000560336 883 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 AC068137.2-201ENST00000605408 478 ntBASIC11.61□□□□□ -0.55
LINC01559Q495D7 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 MIR7706-201ENST00000613747 67 ntBASIC11.61□□□□□ -0.55
LINC01559Q495D7 AL773604.1-201ENST00000617417 272 ntBASIC11.61□□□□□ -0.55
LINC01559Q495D7 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 AC140479.7-201ENST00000636301 2332 ntBASIC11.61□□□□□ -0.55
LINC01559Q495D7 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
LINC01559Q495D7 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01559Q495D7 BCAR1-209ENST00000546196 1340 ntBASIC11.6□□□□□ -0.55
LINC01559Q495D7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01559Q495D7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01559Q495D7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01559Q495D7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01559Q495D7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01559Q495D7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
LINC01559Q495D7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01559Q495D7 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01559Q495D7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01559Q495D7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01559Q495D7 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01559Q495D7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01559Q495D7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01559Q495D7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01559Q495D7 AC005252.3-201ENST00000623855 2258 ntBASIC11.6□□□□□ -0.55
LINC01559Q495D7 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01559Q495D7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms